Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1385

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,626,141	-				-2.2
1,626,254	+		Pf6N2E2_1384	0.20	+0.8
1,626,404	+		Pf6N2E2_1384	0.37	-2.0
1,626,404	+		Pf6N2E2_1384	0.37	-1.8
1,626,404	+		Pf6N2E2_1384	0.37	-1.2
1,626,405	-		Pf6N2E2_1384	0.37	-1.6
1,626,405	-		Pf6N2E2_1384	0.37	+0.8
1,626,590	+		Pf6N2E2_1384	0.57	-0.2
1,626,591	-		Pf6N2E2_1384	0.57	+0.8
1,626,591	-		Pf6N2E2_1384	0.57	-3.5
1,626,689	-		Pf6N2E2_1384	0.67	+0.8
1,626,689	-		Pf6N2E2_1384	0.67	-2.6
1,626,689	-		Pf6N2E2_1384	0.67	+0.8
1,627,033	+				-1.3
1,627,033	+				-1.4
1,627,033	+				+0.8
1,627,034	-				+0.5
1,627,530	-		Pf6N2E2_1385	0.69	-2.6
1,627,663	-		Pf6N2E2_1385	0.86	-0.8
1,627,663	-		Pf6N2E2_1385	0.86	-1.6
1,627,780	+				+0.8
1,627,786	+				+0.8
1,627,786	+				-0.8
1,627,787	-				-0.2
1,627,787	-				-0.8
1,627,787	-				+0.8
1,627,826	-				-0.8
1,627,826	-				-0.2
1,627,882	+		Pf6N2E2_1386	0.12	+0.8
1,628,132	-		Pf6N2E2_1386	0.40	+0.8
1,628,132	-		Pf6N2E2_1386	0.40	-1.5
1,628,132	-		Pf6N2E2_1386	0.40	-1.2
1,628,221	+		Pf6N2E2_1386	0.50	+0.8
1,628,222	-		Pf6N2E2_1386	0.51	+0.8
1,628,249	-		Pf6N2E2_1386	0.54	-0.2
1,628,249	-		Pf6N2E2_1386	0.54	-0.2
1,628,386	+		Pf6N2E2_1386	0.69	-2.7
1,628,387	-		Pf6N2E2_1386	0.69	+0.8
1,628,387	-		Pf6N2E2_1386	0.69	-0.2
1,628,387	-		Pf6N2E2_1386	0.69	-1.2
1,628,387	-		Pf6N2E2_1386	0.69	+0.8
1,628,521	+		Pf6N2E2_1386	0.85	-2.3
1,628,572	-				+0.8
1,628,581	+				-1.5
1,628,582	-				-0.2
1,628,676	-				-2.2
1,628,724	+		Pf6N2E2_1387	0.14	-1.5
1,628,724	+		Pf6N2E2_1387	0.14	+0.8
1,628,724	+		Pf6N2E2_1387	0.14	-2.3
1,628,745	+		Pf6N2E2_1387	0.18	+0.8
1,628,745	+		Pf6N2E2_1387	0.18	+0.8
1,628,745	+		Pf6N2E2_1387	0.18	+0.8
1,628,746	-		Pf6N2E2_1387	0.19	-1.2
1,628,746	-		Pf6N2E2_1387	0.19	-1.5
1,628,746	-		Pf6N2E2_1387	0.19	-0.2
1,628,746	-		Pf6N2E2_1387	0.19	-0.2