Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1339

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,574,469	+		Pf6N2E2_1338	0.47	+0.8
1,574,469	+		Pf6N2E2_1338	0.47	-0.8
1,574,470	-		Pf6N2E2_1338	0.47	+0.8
1,574,470	-		Pf6N2E2_1338	0.47	-0.9
1,574,470	-		Pf6N2E2_1338	0.47	+0.8
1,574,470	-		Pf6N2E2_1338	0.47	-2.0
1,574,520	+		Pf6N2E2_1338	0.52	-0.2
1,574,521	-		Pf6N2E2_1338	0.52	+0.8
1,574,521	-		Pf6N2E2_1338	0.52	-3.0
1,574,619	+		Pf6N2E2_1338	0.62	+0.8
1,574,620	-		Pf6N2E2_1338	0.62	+0.8
1,574,643	+		Pf6N2E2_1338	0.64	+0.8
1,574,643	+		Pf6N2E2_1338	0.64	+0.8
1,574,643	+		Pf6N2E2_1338	0.64	-1.2
1,574,643	+		Pf6N2E2_1338	0.64	-0.2
1,574,644	-		Pf6N2E2_1338	0.64	-0.8
1,574,644	-		Pf6N2E2_1338	0.64	+0.8
1,574,682	+		Pf6N2E2_1338	0.68	-1.3
1,574,682	+		Pf6N2E2_1338	0.68	+0.8
1,574,683	-		Pf6N2E2_1338	0.68	-0.2
1,574,683	-		Pf6N2E2_1338	0.68	+0.8
1,574,683	-		Pf6N2E2_1338	0.68	-1.5
1,574,683	-		Pf6N2E2_1338	0.68	-0.2
1,574,683	-		Pf6N2E2_1338	0.68	+0.8
1,574,835	+		Pf6N2E2_1338	0.83	+0.8
1,574,835	+		Pf6N2E2_1338	0.83	+0.8
1,574,836	-		Pf6N2E2_1338	0.83	-1.2
1,574,887	-		Pf6N2E2_1338	0.88	+0.8
1,574,993	-				-0.2
1,575,082	-				+0.8
1,575,082	-				-0.8
1,575,085	+				+0.8
1,575,102	-				-0.2
1,575,223	+				+0.8
1,575,223	+				+0.8
1,575,224	-				-1.5
1,575,224	-				-0.2
1,575,224	-				-1.1
1,575,280	+				+0.8
1,575,280	+				-0.2
1,575,281	-				-0.2
1,575,539	-		Pf6N2E2_1339	0.29	-2.1
1,576,231	+		Pf6N2E2_1339	0.87	-1.5
1,576,231	+		Pf6N2E2_1339	0.87	-0.5
1,576,267	+				-0.2
1,576,268	-				-2.5
1,576,268	-				+0.8
1,576,899	+		Pf6N2E2_1340	0.80	-1.3
1,576,900	-		Pf6N2E2_1340	0.80	+0.8
1,576,990	+				+0.8
1,577,199	+		Pf6N2E2_1341	0.40	+0.8
1,577,199	+		Pf6N2E2_1341	0.40	+0.8
1,577,199	+		Pf6N2E2_1341	0.40	-0.2
1,577,199	+		Pf6N2E2_1341	0.40	-0.2
1,577,200	-		Pf6N2E2_1341	0.40	-0.2
1,577,200	-		Pf6N2E2_1341	0.40	-0.7
1,577,200	-		Pf6N2E2_1341	0.40	+0.8
1,577,349	+				+0.8
1,577,349	+		Pf6N2E2_1341	0.79	-2.0
1,577,350	-		Pf6N2E2_1341	0.79	-0.8
1,577,350	-		Pf6N2E2_1341	0.79	+0.8