Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_995

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,163,717	-		Pf6N2E2_994	0.19	-0.2
1,163,717	-		Pf6N2E2_994	0.19	-0.2
1,163,717	-		Pf6N2E2_994	0.19	-0.2
1,163,792	+		Pf6N2E2_994	0.26	-0.2
1,163,792	+		Pf6N2E2_994	0.26	+0.8
1,163,793	-		Pf6N2E2_994	0.26	+0.8
1,163,837	+		Pf6N2E2_994	0.30	+0.8
1,163,837	+		Pf6N2E2_994	0.30	+0.8
1,163,916	-		Pf6N2E2_994	0.38	+0.8
1,163,955	+		Pf6N2E2_994	0.41	+0.8
1,163,956	-		Pf6N2E2_994	0.41	-0.2
1,164,007	-		Pf6N2E2_994	0.46	-1.5
1,164,049	+		Pf6N2E2_994	0.50	+0.8
1,164,049	+		Pf6N2E2_994	0.50	-0.2
1,164,049	+		Pf6N2E2_994	0.50	+0.8
1,164,053	+		Pf6N2E2_994	0.50	-0.2
1,164,054	-		Pf6N2E2_994	0.50	-0.2
1,164,054	-		Pf6N2E2_994	0.50	+0.3
1,164,054	-		Pf6N2E2_994	0.50	+0.8
1,164,142	+		Pf6N2E2_994	0.58	-0.8
1,164,142	+		Pf6N2E2_994	0.58	-0.2
1,164,142	+		Pf6N2E2_994	0.58	-0.2
1,164,312	+		Pf6N2E2_994	0.74	-1.5
1,164,313	-		Pf6N2E2_994	0.74	-0.2
1,164,354	-		Pf6N2E2_994	0.78	-0.2
1,164,382	+		Pf6N2E2_994	0.80	-0.8
1,164,382	+		Pf6N2E2_994	0.80	+0.8
1,164,382	+		Pf6N2E2_994	0.80	+0.8
1,164,382	+		Pf6N2E2_994	0.80	-0.5
1,164,382	+		Pf6N2E2_994	0.80	+0.8
1,164,383	-		Pf6N2E2_994	0.81	+0.8
1,164,383	-		Pf6N2E2_994	0.81	-0.2
1,164,383	-		Pf6N2E2_994	0.81	-0.0
1,164,383	-		Pf6N2E2_994	0.81	-0.8
1,164,487	+				+0.8
1,164,487	+				+0.8
1,164,514	+				+0.8
1,164,588	+				+0.8
1,164,623	-				+0.8
1,164,698	+				-0.2
1,164,698	+				+0.8
1,164,698	+				-0.2
1,164,698	+				-0.8
1,164,699	-				+0.8
1,164,699	-				-0.2
1,164,699	-				+1.8
1,164,780	-		Pf6N2E2_995	0.11	-0.2
1,164,780	-		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	-0.9
1,164,782	+		Pf6N2E2_995	0.11	+0.8
1,164,782	+		Pf6N2E2_995	0.11	-0.2
1,164,782	+		Pf6N2E2_995	0.11	-0.2
1,164,783	-		Pf6N2E2_995	0.11	+0.8
1,164,783	-		Pf6N2E2_995	0.11	-0.2
1,164,783	-		Pf6N2E2_995	0.11	+0.8
1,164,783	-		Pf6N2E2_995	0.11	+0.8
1,164,783	-		Pf6N2E2_995	0.11	-0.8
1,164,817	+		Pf6N2E2_995	0.15	-0.9
1,164,834	-		Pf6N2E2_995	0.17	-1.4
1,164,935	-		Pf6N2E2_995	0.30	-0.2
1,165,018	+		Pf6N2E2_995	0.40	+0.8
1,165,018	+		Pf6N2E2_995	0.40	-0.2
1,165,019	-		Pf6N2E2_995	0.40	-0.2
1,165,019	-		Pf6N2E2_995	0.40	+0.8
1,165,029	+		Pf6N2E2_995	0.42	-1.9
1,165,030	-		Pf6N2E2_995	0.42	-0.2
1,165,030	-				+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	-0.2
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,140	+		Pf6N2E2_995	0.55	+0.8
1,165,220	+		Pf6N2E2_995	0.65	+0.8
1,165,220	+		Pf6N2E2_995	0.65	-1.1
1,165,220	+		Pf6N2E2_995	0.65	+0.8
1,165,255	-		Pf6N2E2_995	0.70	-0.8
1,165,255	-		Pf6N2E2_995	0.70	+0.8
1,165,444	+				-0.2
1,165,445	-				+0.8
1,165,498	+				+0.8
1,165,498	+				+0.8
1,165,705	+		Pf6N2E2_996	0.40	-0.2
1,165,872	-				-0.5
1,165,905	-				+0.8
1,165,961	+				+0.8
1,165,961	+				+0.8
1,165,961	+				-0.8
1,165,961	+				+0.8
1,165,970	+				+0.8
1,165,970	+				+0.8
1,166,006	+				-0.8
1,166,006	+				+0.8
1,166,006	+				-0.2
1,166,007	-				+0.8
1,166,009	+				-0.2
1,166,009	+				+0.8
1,166,009	+				+0.8
1,166,114	+		Pf6N2E2_997	0.20	+0.8
1,166,146	+		Pf6N2E2_997	0.24	-1.0
1,166,147	-		Pf6N2E2_997	0.24	-0.2
1,166,212	+		Pf6N2E2_997	0.33	+0.8
1,166,212	+		Pf6N2E2_997	0.33	+0.8
1,166,259	-				+0.8
1,166,285	+		Pf6N2E2_997	0.43	+0.8
1,166,285	+		Pf6N2E2_997	0.43	-1.2
1,166,285	+		Pf6N2E2_997	0.43	-0.8
1,166,285	+		Pf6N2E2_997	0.43	-0.2
1,166,286	-		Pf6N2E2_997	0.43	+0.8
1,166,286	-		Pf6N2E2_997	0.43	+0.8
1,166,289	-		Pf6N2E2_997	0.44	-0.8
1,166,311	+		Pf6N2E2_997	0.47	+0.8
1,166,312	-		Pf6N2E2_997	0.47	+0.8
1,166,330	+		Pf6N2E2_997	0.50	+0.8
1,166,330	+		Pf6N2E2_997	0.50	+0.8
1,166,330	+		Pf6N2E2_997	0.50	+0.8
1,166,331	-		Pf6N2E2_997	0.50	-1.0
1,166,360	+		Pf6N2E2_997	0.54	-0.8
1,166,361	-		Pf6N2E2_997	0.54	+1.8
1,166,361	-		Pf6N2E2_997	0.54	-0.2