Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_880

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
1,028,418	+				+1.4
1,028,452	-				-1.1
1,028,480	+				+0.8
1,028,480	+				+0.8
1,028,480	+				-3.0
1,028,480	+				-0.7
1,028,480	+				-0.2
1,028,480	+				-0.8
1,028,480	+				+0.8
1,028,481	-				+0.8
1,028,481	-				-0.2
1,028,481	-				-0.2
1,028,481	-				+0.8
1,028,654	-				-1.7
1,028,661	+				+0.8
1,028,661	+				-0.2
1,028,661	+				+0.8
1,028,662	-				-2.2
1,028,662	-				+0.8
1,028,662	-				-1.8
1,028,759	+				-0.2
1,028,760	-				-0.3
1,028,760	-				+0.8
1,028,765	+				-0.2
1,028,765	+				+0.8
1,028,765	+				+0.8
1,028,766	-				+0.8
1,028,766	-				-0.8
1,028,992	+		Pf6N2E2_879	0.41	-0.9
1,028,993	-		Pf6N2E2_879	0.41	+0.8
1,029,082	+		Pf6N2E2_879	0.58	+0.8
1,029,083	-		Pf6N2E2_879	0.58	+0.8
1,029,161	+		Pf6N2E2_879	0.73	+0.1
1,029,161	+		Pf6N2E2_879	0.73	+0.8
1,029,161	+		Pf6N2E2_879	0.73	+0.8
1,029,161	+		Pf6N2E2_879	0.73	-0.5
1,029,162	-		Pf6N2E2_879	0.73	+0.8
1,029,162	-		Pf6N2E2_879	0.73	+0.8
1,029,162	-		Pf6N2E2_879	0.73	+0.8
1,029,162	-		Pf6N2E2_879	0.73	-0.8
1,029,210	+		Pf6N2E2_879	0.82	+0.8
1,029,229	+		Pf6N2E2_879	0.86	+0.8
1,029,230	-		Pf6N2E2_879	0.86	-1.5
1,029,230	-		Pf6N2E2_879	0.86	-0.8
1,029,230	-		Pf6N2E2_879	0.86	+0.5
1,029,230	-		Pf6N2E2_879	0.86	+0.8
1,029,230	-		Pf6N2E2_879	0.86	+0.2
1,029,242	-		Pf6N2E2_879	0.88	-0.4
1,029,258	-				-0.2
1,029,259	+				-0.2
1,029,259	+				-1.2
1,029,260	-				-0.7
1,029,260	-				+0.8
1,029,260	-				+0.8
1,029,260	-				-0.2
1,029,379	-				+0.8
1,029,395	-				-0.4
1,029,411	-				-1.2
1,029,426	-				+0.8
1,029,647	+		Pf6N2E2_880	0.27	-1.8
1,029,658	+		Pf6N2E2_880	0.29	+0.8
1,029,672	-		Pf6N2E2_880	0.30	+0.8
1,029,786	-		Pf6N2E2_880	0.43	-0.2
1,029,786	-		Pf6N2E2_880	0.43	-0.2
1,029,786	-		Pf6N2E2_880	0.43	+0.8
1,029,849	-		Pf6N2E2_880	0.51	+0.8
1,029,866	+		Pf6N2E2_880	0.53	+0.8
1,029,866	+		Pf6N2E2_880	0.53	+0.8
1,029,867	-		Pf6N2E2_880	0.53	-0.2
1,029,872	+		Pf6N2E2_880	0.53	-0.2
1,029,873	-		Pf6N2E2_880	0.54	-0.8
1,030,049	+		Pf6N2E2_880	0.74	-1.8
1,030,049	+		Pf6N2E2_880	0.74	-0.2
1,030,050	-		Pf6N2E2_880	0.74	+0.8
1,030,124	+		Pf6N2E2_880	0.82	+0.8
1,030,151	+		Pf6N2E2_880	0.86	+0.8
1,030,152	-		Pf6N2E2_880	0.86	+0.8
1,030,193	+				-0.8
1,030,193	+				-1.3
1,030,421	+				-0.2
1,030,422	-				-0.2
1,030,518	+		Pf6N2E2_881	0.15	+0.8
1,030,518	+		Pf6N2E2_881	0.15	+0.8
1,030,522	+		Pf6N2E2_881	0.15	-0.5
1,030,523	-		Pf6N2E2_881	0.15	+0.8
1,030,589	+		Pf6N2E2_881	0.21	-1.0
1,030,646	+		Pf6N2E2_881	0.27	-0.2
1,030,646	+		Pf6N2E2_881	0.27	+0.8
1,030,721	+		Pf6N2E2_881	0.34	+0.2
1,030,722	-		Pf6N2E2_881	0.34	-0.5
1,030,881	+		Pf6N2E2_881	0.49	+0.8
1,030,882	-		Pf6N2E2_881	0.49	+1.4
1,030,882	-		Pf6N2E2_881	0.49	+0.8
1,030,882	-		Pf6N2E2_881	0.49	-0.2
1,030,985	+		Pf6N2E2_881	0.59	-0.2
1,030,985	+		Pf6N2E2_881	0.59	+0.3
1,030,986	-		Pf6N2E2_881	0.59	+0.6
1,030,986	-		Pf6N2E2_881	0.59	+2.4
1,030,986	-		Pf6N2E2_881	0.59	-0.2
1,031,095	+		Pf6N2E2_881	0.69	+0.8
1,031,096	-		Pf6N2E2_881	0.69	+0.8
1,031,096	-		Pf6N2E2_881	0.69	-0.2
1,031,174	+		Pf6N2E2_881	0.77	+0.8
1,031,175	-		Pf6N2E2_881	0.77	-0.2
1,031,228	+		Pf6N2E2_881	0.82	-0.2
1,031,229	-		Pf6N2E2_881	0.82	+0.8