Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5231

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
6,027,872	+		Pf6N2E2_5230	0.17	+1.0
6,027,872	+		Pf6N2E2_5230	0.17	+1.0
6,027,872	+		Pf6N2E2_5230	0.17	+0.0
6,027,872	+		Pf6N2E2_5230	0.17	+0.0
6,027,872	+		Pf6N2E2_5230	0.17	-2.0
6,027,872	+		Pf6N2E2_5230	0.17	+1.0
6,027,872	+		Pf6N2E2_5230	0.17	+0.0
6,027,872	+		Pf6N2E2_5230	0.17	+0.0
6,027,872	+		Pf6N2E2_5230	0.17	+1.0
6,027,872	+		Pf6N2E2_5230	0.17	-0.5
6,027,872	+		Pf6N2E2_5230	0.17	+1.0
6,027,872	+		Pf6N2E2_5230	0.17	+1.0
6,027,873	-		Pf6N2E2_5230	0.17	-1.3
6,027,873	-		Pf6N2E2_5230	0.17	+1.0
6,027,873	-		Pf6N2E2_5230	0.17	-0.6
6,027,873	-		Pf6N2E2_5230	0.17	+1.0
6,027,993	+		Pf6N2E2_5230	0.29	-1.0
6,027,994	-		Pf6N2E2_5230	0.29	-0.9
6,027,994	-		Pf6N2E2_5230	0.29	+1.0
6,028,059	+		Pf6N2E2_5230	0.36	+0.3
6,028,059	+		Pf6N2E2_5230	0.36	+1.0
6,028,059	+		Pf6N2E2_5230	0.36	+1.0
6,028,059	+		Pf6N2E2_5230	0.36	-2.0
6,028,059	+		Pf6N2E2_5230	0.36	+1.0
6,028,059	+		Pf6N2E2_5230	0.36	+1.0
6,028,059	+		Pf6N2E2_5230	0.36	+1.0
6,028,059	+		Pf6N2E2_5230	0.36	-1.0
6,028,059	+		Pf6N2E2_5230	0.36	-0.6
6,028,059	+		Pf6N2E2_5230	0.36	+1.6
6,028,060	-		Pf6N2E2_5230	0.36	+0.0
6,028,060	-		Pf6N2E2_5230	0.36	+1.0
6,028,060	-		Pf6N2E2_5230	0.36	+1.0
6,028,060	-		Pf6N2E2_5230	0.36	+0.0
6,028,060	-		Pf6N2E2_5230	0.36	-0.6
6,028,060	-		Pf6N2E2_5230	0.36	+1.0
6,028,060	-		Pf6N2E2_5230	0.36	-1.1
6,028,060	-		Pf6N2E2_5230	0.36	+1.0
6,028,089	+		Pf6N2E2_5230	0.39	-0.6
6,028,095	+		Pf6N2E2_5230	0.40	-0.9
6,028,095	+		Pf6N2E2_5230	0.40	+0.0
6,028,269	+		Pf6N2E2_5230	0.58	-2.0
6,028,269	+		Pf6N2E2_5230	0.58	-0.3
6,028,270	-		Pf6N2E2_5230	0.58	-1.1
6,028,270	-		Pf6N2E2_5230	0.58	+0.0
6,028,270	-		Pf6N2E2_5230	0.58	-0.6
6,028,270	-		Pf6N2E2_5230	0.58	+1.0
6,028,270	-		Pf6N2E2_5230	0.58	+1.0
6,028,270	-		Pf6N2E2_5230	0.58	+1.0
6,028,314	+		Pf6N2E2_5230	0.62	+1.2
6,028,314	+		Pf6N2E2_5230	0.62	+0.0
6,028,363	+		Pf6N2E2_5230	0.67	-0.6
6,028,364	-		Pf6N2E2_5230	0.68	-0.7
6,028,364	-		Pf6N2E2_5230	0.68	-0.6
6,028,364	-		Pf6N2E2_5230	0.68	-0.4
6,028,364	-		Pf6N2E2_5230	0.68	-1.0
6,028,364	-		Pf6N2E2_5230	0.68	+1.0
6,028,364	-		Pf6N2E2_5230	0.68	+0.1
6,028,365	+		Pf6N2E2_5230	0.68	+2.0
6,028,365	+		Pf6N2E2_5230	0.68	+1.0
6,028,365	+		Pf6N2E2_5230	0.68	+1.0
6,028,365	+		Pf6N2E2_5230	0.68	-0.6
6,028,366	-		Pf6N2E2_5230	0.68	+1.0
6,028,366	-		Pf6N2E2_5230	0.68	-1.3
6,028,407	+		Pf6N2E2_5230	0.72	+1.0
6,028,554	+		Pf6N2E2_5230	0.87	-0.3
6,028,675	+				-0.6
6,028,675	+				+0.0
6,028,675	+				-0.4
6,028,675	+				-0.7
6,028,676	-				+1.0
6,028,676	-				+1.0
6,028,736	+				+1.0
6,028,736	+				+0.0
6,028,736	+				-0.9
6,028,737	-				-0.6
6,028,849	+				+1.0
6,028,850	-				+1.0
6,028,850	-				-0.7
6,028,942	+				+1.0
6,028,942	+				-0.6
6,028,942	+				-0.3
6,028,942	+				-0.1
6,028,942	+				+0.0
6,028,942	+				-0.9
6,028,942	+				+2.6
6,028,942	+				+1.0
6,028,942	+				+0.0
6,028,942	+				+0.0
6,028,943	-				-1.6
6,028,943	-				-0.8
6,028,943	-				+1.0
6,028,943	-				+1.0
6,028,943	-				+1.0
6,028,943	-				+1.0
6,028,943	-				+1.0
6,028,943	-				+1.0
6,028,943	-				-3.5
6,029,002	+		Pf6N2E2_5231	0.16	+0.0
6,029,243	+		Pf6N2E2_5231	0.40	-1.8
6,029,440	+		Pf6N2E2_5231	0.60	+0.0
6,029,440	+		Pf6N2E2_5231	0.60	-1.8
6,029,440	+		Pf6N2E2_5231	0.60	-1.0
6,029,440	+		Pf6N2E2_5231	0.60	+0.0
6,029,441	-		Pf6N2E2_5231	0.60	-1.0
6,029,475	+		Pf6N2E2_5231	0.64	+1.0
6,029,475	+		Pf6N2E2_5231	0.64	-1.0
6,029,578	+		Pf6N2E2_5231	0.74	+1.0
6,029,579	-		Pf6N2E2_5231	0.74	+0.0
6,029,579	-		Pf6N2E2_5231	0.74	+1.0
6,029,579	-		Pf6N2E2_5231	0.74	+0.0
6,029,579	-		Pf6N2E2_5231	0.74	+1.0
6,029,665	+		Pf6N2E2_5231	0.83	+0.0
6,029,666	-		Pf6N2E2_5231	0.83	+1.0
6,029,756	+				-0.8
6,029,756	+				+0.0
6,029,823	-				+0.6
6,029,823	-				+0.0
6,029,823	-				-0.7
6,029,826	+				+0.0
6,029,826	+				+1.0
6,029,826	+				+1.0
6,029,826	+				+1.0
6,029,826	+				-0.8
6,029,826	+				+1.0
6,029,827	-				+1.0
6,029,827	-				+1.0
6,029,827	-				+0.4
6,029,848	-				+1.0
6,029,858	-				+1.0
6,029,858	-				+1.0
6,029,864	+				-2.1
6,029,865	-				-0.6
6,029,904	+				+1.0
6,029,904	+				-0.6
6,029,905	-				+0.0
6,029,938	+				+1.0
6,029,938	+				-0.6
6,029,938	+				+1.0
6,029,939	-				-1.2
6,029,939	-				-1.2
6,029,939	-				+1.0
6,029,939	-				+0.0
6,029,939	-				+0.0
6,029,944	+				-0.5
6,029,945	-				-1.4
6,029,981	+				+1.0
6,029,989	+				+0.0
6,029,994	+				-0.6
6,029,994	+				-0.6
6,030,038	+				-0.7
6,030,038	+				+0.2
6,030,038	+				+1.0
6,030,038	+				-1.3
6,030,038	+				-0.6
6,030,038	+				-1.0
6,030,038	+				+0.0
6,030,038	+				+1.0
6,030,038	+				+0.0
6,030,038	+				+1.0
6,030,038	+				-0.6
6,030,038	+				+0.0
6,030,038	+				+1.0
6,030,038	+				-0.6
6,030,038	+				-0.9
6,030,038	+				+1.0
6,030,039	-				-0.1
6,030,039	-				-0.6
6,030,039	-				-0.3
6,030,039	-				+1.0
6,030,039	-				+1.0
6,030,039	-				+1.0
6,030,039	-				+1.0
6,030,039	-				+1.0
6,030,039	-				+1.0
6,030,039	-				-0.8
6,030,039	-				-1.5
6,030,039	-				+1.0
6,030,039	-				+0.0
6,030,164	+		Pf6N2E2_5232	0.15	+0.0
6,030,164	+		Pf6N2E2_5232	0.15	+1.0
6,030,164	+		Pf6N2E2_5232	0.15	-0.6
6,030,164	+		Pf6N2E2_5232	0.15	+0.0
6,030,164	+		Pf6N2E2_5232	0.15	-0.6
6,030,164	+		Pf6N2E2_5232	0.15	+0.2
6,030,165	-		Pf6N2E2_5232	0.15	+1.6
6,030,165	-		Pf6N2E2_5232	0.15	+0.0
6,030,165	-		Pf6N2E2_5232	0.15	-0.7
6,030,165	-		Pf6N2E2_5232	0.15	-0.1
6,030,494	+		Pf6N2E2_5232	0.51	+0.0
6,030,495	-		Pf6N2E2_5232	0.52	-0.7
6,030,591	+		Pf6N2E2_5232	0.62	+1.0
6,030,627	+		Pf6N2E2_5232	0.66	+1.0
6,030,627	+		Pf6N2E2_5232	0.66	-0.9
6,030,628	-		Pf6N2E2_5232	0.66	+1.0
6,030,688	+		Pf6N2E2_5232	0.73	-0.2
6,030,688	+		Pf6N2E2_5232	0.73	-1.2
6,030,688	+		Pf6N2E2_5232	0.73	-0.6
6,030,688	+		Pf6N2E2_5232	0.73	-0.8
6,030,688	+		Pf6N2E2_5232	0.73	+1.0
6,030,689	-		Pf6N2E2_5232	0.73	+1.0
6,030,689	-		Pf6N2E2_5232	0.73	-0.5
6,030,689	-		Pf6N2E2_5232	0.73	+0.0
6,030,690	+		Pf6N2E2_5232	0.73	+0.0
6,030,690	+		Pf6N2E2_5232	0.73	-1.7
6,030,690	+		Pf6N2E2_5232	0.73	+0.0
6,030,690	+		Pf6N2E2_5232	0.73	-0.9
6,030,690	+		Pf6N2E2_5232	0.73	+0.0
6,030,690	+		Pf6N2E2_5232	0.73	-1.3
6,030,690	+		Pf6N2E2_5232	0.73	+1.0
6,030,749	+		Pf6N2E2_5232	0.80	+0.0
6,030,749	+		Pf6N2E2_5232	0.80	-0.5
6,030,749	+		Pf6N2E2_5232	0.80	-0.6
6,030,749	+		Pf6N2E2_5232	0.80	-1.3
6,030,749	+		Pf6N2E2_5232	0.80	-1.0
6,030,749	+		Pf6N2E2_5232	0.80	+3.3
6,030,749	+		Pf6N2E2_5232	0.80	+0.0
6,030,749	+		Pf6N2E2_5232	0.80	+1.0