Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3997

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
4,666,651	-		Pf6N2E2_3996	0.44	+1.1
4,666,651	-		Pf6N2E2_3996	0.44	-1.3
4,666,651	-		Pf6N2E2_3996	0.44	-0.1
4,666,687	-		Pf6N2E2_3996	0.47	-0.5
4,666,704	+		Pf6N2E2_3996	0.49	+0.1
4,666,705	-		Pf6N2E2_3996	0.49	-1.2
4,666,878	-		Pf6N2E2_3996	0.66	-0.3
4,666,919	-		Pf6N2E2_3996	0.70	+0.1
4,666,919	-		Pf6N2E2_3996	0.70	+1.1
4,667,121	+				+1.1
4,667,122	-				-0.1
4,667,122	-				+1.1
4,667,335	+				+1.1
4,667,337	+				-0.5
4,667,337	+				+0.1
4,667,337	+				-1.0
4,667,337	+				-0.9
4,667,338	-				+0.1
4,667,724	-		Pf6N2E2_3997	0.46	-0.5
4,667,868	+		Pf6N2E2_3997	0.67	+0.3
4,667,868	+		Pf6N2E2_3997	0.67	+1.1
4,667,869	-		Pf6N2E2_3997	0.67	+1.1
4,667,936	+		Pf6N2E2_3997	0.77	+0.1
4,667,937	-		Pf6N2E2_3997	0.77	-0.2
4,667,937	-		Pf6N2E2_3997	0.77	-1.2
4,667,937	-		Pf6N2E2_3997	0.77	+1.1
4,668,019	-		Pf6N2E2_3997	0.89	+1.1
4,668,019	-		Pf6N2E2_3997	0.89	+0.5
4,668,019	-		Pf6N2E2_3997	0.89	+1.1
4,668,019	-		Pf6N2E2_3997	0.89	+1.1
4,668,019	-		Pf6N2E2_3997	0.89	-0.5
4,668,025	+				+1.1
4,668,025	+				+1.1
4,668,026	-				+1.1
4,668,026	-				+1.1
4,668,026	-				-0.9
4,668,047	+				+1.1
4,668,048	-				+0.1
4,668,048	-				+0.1
4,668,048	-				-0.5
4,668,212	+				-2.0
4,668,213	-				+0.1
4,668,221	+				-1.5
4,668,222	-				-0.4
4,668,374	+		Pf6N2E2_3998	0.37	-0.2
4,668,374	+		Pf6N2E2_3998	0.37	+1.1
4,668,374	+		Pf6N2E2_3998	0.37	-0.3
4,668,375	-		Pf6N2E2_3998	0.37	+0.1
4,668,375	-		Pf6N2E2_3998	0.37	+0.1
4,668,378	+		Pf6N2E2_3998	0.37	+0.1
4,668,378	+		Pf6N2E2_3998	0.37	+0.1
4,668,378	+		Pf6N2E2_3998	0.37	-0.5
4,668,379	-				+1.1
4,668,379	-		Pf6N2E2_3998	0.38	-0.5
4,668,533	+		Pf6N2E2_3998	0.67	+1.1
4,668,536	+		Pf6N2E2_3998	0.67	+0.1
4,668,536	+		Pf6N2E2_3998	0.67	-0.5
4,668,536	+		Pf6N2E2_3998	0.67	+1.1
4,668,536	+		Pf6N2E2_3998	0.67	+1.1
4,668,537	-		Pf6N2E2_3998	0.68	-0.9
4,668,537	-		Pf6N2E2_3998	0.68	+0.1
4,668,537	-		Pf6N2E2_3998	0.68	+0.1
4,668,537	-		Pf6N2E2_3998	0.68	+0.1
4,668,621	+		Pf6N2E2_3998	0.84	-0.7
4,668,769	-				+0.1
4,668,811	+				+1.1
4,668,978	+				-0.9
4,668,978	+				-0.1
4,668,979	-				-0.3
4,668,979	-				-1.0
4,668,979	-				-0.3
4,668,979	-				+0.7
4,668,979	-				-0.5
4,668,979	-				+1.1
4,668,979	-				+1.1
4,668,979	-				-1.2
4,669,049	+		Pf6N2E2_3999	0.13	-0.6
4,669,050	-		Pf6N2E2_3999	0.13	-0.5