Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1958

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
2,322,344	+		Pf6N2E2_1957	0.45	+0.8
2,322,451	+		Pf6N2E2_1957	0.53	+0.8
2,322,484	+		Pf6N2E2_1957	0.56	-0.8
2,322,508	+		Pf6N2E2_1957	0.58	+0.8
2,322,508	+		Pf6N2E2_1957	0.58	-0.6
2,322,611	+		Pf6N2E2_1957	0.65	+0.8
2,322,807	+		Pf6N2E2_1957	0.80	+0.8
2,322,966	+				-1.5
2,322,966	+				+0.9
2,322,967	-				-0.9
2,322,967	-				+0.9
2,322,967	-				+0.9
2,323,029	+				+0.9
2,323,071	-				+0.9
2,323,201	+				+0.9
2,323,201	+				-1.7
2,323,202	-				-0.5
2,323,202	-				+0.9
2,323,459	+		Pf6N2E2_1958	0.41	-1.1
2,323,459	+		Pf6N2E2_1958	0.41	-1.0
2,323,459	+		Pf6N2E2_1958	0.41	-0.7
2,323,459	+		Pf6N2E2_1958	0.41	-2.7
2,323,462	-		Pf6N2E2_1958	0.42	-0.1
2,323,507	-		Pf6N2E2_1958	0.50	-0.1
2,323,777	-				-0.7
2,323,777	-				-1.1
2,323,800	+				+0.9
2,323,804	+				-0.1
2,323,805	-				+0.9
2,323,805	-				+0.9
2,323,805	-				+0.9
2,323,824	+				-0.1
2,323,999	-				-0.1
2,324,016	+				-0.6
2,324,123	+		Pf6N2E2_1959	0.20	-1.5
2,324,251	+		Pf6N2E2_1959	0.37	+0.9
2,324,578	-		Pf6N2E2_1959	0.79	-0.7
2,324,637	-		Pf6N2E2_1959	0.87	+0.9
2,324,664	+				-0.1
2,324,664	+				+0.3
2,324,664	+				+0.9
2,324,665	-				-0.7
2,324,665	-				-0.1
2,324,665	-				+0.9
2,324,665	-				-0.7
2,324,722	+				-0.7
2,324,748	-				-0.1