Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1922

Experiment: Ying_Others16 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 1
2,274,259	-		Pf6N2E2_1919	0.78	-0.7
2,274,259	-		Pf6N2E2_1919	0.78	+0.9
2,274,341	+		Pf6N2E2_1919	0.84	+0.9
2,274,341	+		Pf6N2E2_1919	0.84	+0.9
2,274,341	+		Pf6N2E2_1919	0.84	-2.5
2,274,342	-		Pf6N2E2_1919	0.84	-0.5
2,274,344	+		Pf6N2E2_1919	0.84	+0.9
2,274,345	-		Pf6N2E2_1919	0.84	-0.7
2,274,345	-		Pf6N2E2_1919	0.84	+0.9
2,274,345	-		Pf6N2E2_1919	0.84	-0.2
2,274,557	+				-0.1
2,274,558	-				+0.9
2,274,558	-				+0.9
2,274,558	-				+0.9
2,274,664	-				+0.9
2,274,664	-				+0.9
2,274,760	-		Pf6N2E2_1920	0.45	+0.9
2,274,760	-		Pf6N2E2_1920	0.45	-0.1
2,274,777	-		Pf6N2E2_1920	0.54	+0.9
2,274,777	-		Pf6N2E2_1920	0.54	+0.9
2,274,896	+				+0.9
2,274,935	+		Pf6N2E2_1921	0.29	-0.1
2,275,033	-				-0.1
2,275,033	-				-0.1
2,275,033	-				+0.9
2,275,094	+				+0.9
2,275,115	-				-1.1
2,275,178	-				+0.9
2,275,216	+				+0.9
2,275,257	-		Pf6N2E2_1922	0.11	-0.7
2,275,257	-		Pf6N2E2_1922	0.11	-2.1
2,275,257	-		Pf6N2E2_1922	0.11	-0.3
2,275,299	+		Pf6N2E2_1922	0.13	-0.4
2,275,299	+		Pf6N2E2_1922	0.13	-0.4
2,275,335	-		Pf6N2E2_1922	0.14	+0.9
2,275,430	-		Pf6N2E2_1922	0.19	-1.5
2,275,501	+		Pf6N2E2_1922	0.22	-0.1
2,275,502	-		Pf6N2E2_1922	0.22	+0.9
2,275,541	-		Pf6N2E2_1922	0.24	-0.1
2,275,650	+		Pf6N2E2_1922	0.29	+0.9
2,275,651	-		Pf6N2E2_1922	0.29	+0.9
2,275,975	-		Pf6N2E2_1922	0.45	+0.9
2,276,026	+		Pf6N2E2_1922	0.47	+0.9
2,276,107	+		Pf6N2E2_1922	0.51	-0.1
2,276,108	-		Pf6N2E2_1922	0.51	+0.9
2,276,118	+		Pf6N2E2_1922	0.52	+0.9
2,276,119	-		Pf6N2E2_1922	0.52	-0.1
2,276,119	-		Pf6N2E2_1922	0.52	-1.6
2,276,572	+		Pf6N2E2_1922	0.73	+0.9
2,276,572	+		Pf6N2E2_1922	0.73	-0.1
2,276,631	-		Pf6N2E2_1922	0.76	-0.1
2,276,631	-		Pf6N2E2_1922	0.76	-1.3
2,276,631	-		Pf6N2E2_1922	0.76	-0.1
2,276,910	-		Pf6N2E2_1922	0.89	-1.5
2,276,942	+				+0.9
2,276,943	-				-0.7
2,277,420	+				-0.1
2,277,420	+				-0.1
2,277,432	+				-0.1
2,277,432	+				+0.9
2,277,433	-				+0.9
2,277,433	-				-0.1
2,277,446	+				+0.9
2,277,446	+				-0.7
2,277,446	+				-0.1
2,277,446	+				-1.4
2,277,446	+				-0.7
2,277,446	+				-0.8
2,277,447	-				-0.1
2,277,447	-				-0.1
2,277,447	-				+0.9
2,277,461	+				+0.9
2,277,461	+				-0.1
2,277,507	+				+0.0
2,277,507	+				+0.9
2,277,508	-				-1.1
2,277,508	-				+0.9
2,277,508	-				-0.1
2,277,606	+		Pf6N2E2_1923	0.15	+0.9
2,277,606	+		Pf6N2E2_1923	0.15	-0.7
2,277,606	+		Pf6N2E2_1923	0.15	-1.3
2,277,606	+		Pf6N2E2_1923	0.15	-0.7
2,277,607	-		Pf6N2E2_1923	0.16	+0.9
2,277,607	-		Pf6N2E2_1923	0.16	+0.9
2,277,607	-		Pf6N2E2_1923	0.16	+0.9
2,277,607	-		Pf6N2E2_1923	0.16	+0.9
2,277,623	+		Pf6N2E2_1923	0.17	-0.1
2,277,623	+		Pf6N2E2_1923	0.17	+0.9
2,277,798	+		Pf6N2E2_1923	0.32	+0.9
2,277,799	-		Pf6N2E2_1923	0.32	+0.9
2,277,839	+		Pf6N2E2_1923	0.35	+0.9
2,277,839	+		Pf6N2E2_1923	0.35	-0.9
2,277,839	+		Pf6N2E2_1923	0.35	+0.9
2,277,840	-		Pf6N2E2_1923	0.35	+0.9
2,277,840	-		Pf6N2E2_1923	0.35	+0.9
2,277,840	-		Pf6N2E2_1923	0.35	+0.9
2,277,842	-		Pf6N2E2_1923	0.36	-0.7
2,277,896	+		Pf6N2E2_1923	0.40	-1.7
2,278,002	+		Pf6N2E2_1923	0.49	-0.7
2,278,002	+		Pf6N2E2_1923	0.49	+0.9
2,278,002	+		Pf6N2E2_1923	0.49	+0.9
2,278,003	-		Pf6N2E2_1923	0.49	+0.9
2,278,079	-		Pf6N2E2_1923	0.56	-0.1
2,278,131	+		Pf6N2E2_1923	0.60	-0.7