Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_860

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,006,766	-		Pf6N2E2_859	0.46	-0.8
1,006,934	+		Pf6N2E2_859	0.57	+0.8
1,006,962	+		Pf6N2E2_859	0.59	+0.1
1,006,963	-		Pf6N2E2_859	0.59	+0.8
1,007,047	+		Pf6N2E2_859	0.64	-0.8
1,007,140	+		Pf6N2E2_859	0.70	-0.2
1,007,141	-		Pf6N2E2_859	0.70	-0.9
1,007,141	-		Pf6N2E2_859	0.70	-0.2
1,007,141	-		Pf6N2E2_859	0.70	-0.2
1,007,299	+		Pf6N2E2_859	0.80	+0.8
1,007,300	-		Pf6N2E2_859	0.80	+0.8
1,007,300	-		Pf6N2E2_859	0.80	-0.2
1,007,384	+		Pf6N2E2_859	0.85	-1.6
1,007,384	+		Pf6N2E2_859	0.85	-1.5
1,007,384	+		Pf6N2E2_859	0.85	-0.8
1,007,385	-		Pf6N2E2_859	0.85	-1.6
1,007,385	-		Pf6N2E2_859	0.85	-1.3
1,007,514	+				-0.3
1,007,515	-				+0.8
1,007,519	+				-0.2
1,007,519	+				+0.8
1,007,519	+				+0.8
1,007,647	+				+0.8
1,007,647	+				-0.2
1,007,647	+				+0.8
1,007,647	+				-0.2
1,007,647	+				-0.2
1,007,647	+				+0.8
1,007,647	+				-0.8
1,007,647	+				+0.8
1,007,647	+				-0.1
1,007,648	-				+1.2
1,007,648	-				+2.9
1,007,648	-				+0.8
1,007,648	-				+0.8
1,007,648	-				-0.2
1,007,878	+		Pf6N2E2_860	0.13	-0.6
1,007,919	+		Pf6N2E2_860	0.16	-0.2
1,007,920	-		Pf6N2E2_860	0.16	+0.8
1,007,997	+		Pf6N2E2_860	0.21	-0.2
1,007,998	-		Pf6N2E2_860	0.21	+0.8
1,008,055	-		Pf6N2E2_860	0.24	+0.2
1,008,055	-		Pf6N2E2_860	0.24	+0.2
1,008,155	-		Pf6N2E2_860	0.31	-0.2
1,008,155	-		Pf6N2E2_860	0.31	-0.2
1,008,176	-		Pf6N2E2_860	0.32	-1.1
1,008,186	+		Pf6N2E2_860	0.33	+0.8
1,008,187	-		Pf6N2E2_860	0.33	+0.8
1,008,274	-		Pf6N2E2_860	0.39	+0.8
1,008,274	-		Pf6N2E2_860	0.39	-1.5
1,008,359	-		Pf6N2E2_860	0.44	+0.8
1,008,370	-		Pf6N2E2_860	0.45	-0.4
1,008,499	+		Pf6N2E2_860	0.53	-0.2
1,008,499	+		Pf6N2E2_860	0.53	+0.8
1,008,500	-		Pf6N2E2_860	0.53	+0.8
1,008,535	+		Pf6N2E2_860	0.55	+0.8
1,008,567	-		Pf6N2E2_860	0.57	+0.8
1,008,567	-				+1.8
1,008,826	+		Pf6N2E2_860	0.74	-0.2
1,008,826	+		Pf6N2E2_860	0.74	+0.8
1,008,826	+		Pf6N2E2_860	0.74	+0.8
1,008,826	+		Pf6N2E2_860	0.74	+0.8
1,008,827	-		Pf6N2E2_860	0.74	+0.8
1,008,841	-		Pf6N2E2_860	0.75	-0.8
1,008,841	-		Pf6N2E2_860	0.75	+0.8
1,008,841	-		Pf6N2E2_860	0.75	+1.8
1,008,841	-		Pf6N2E2_860	0.75	+0.8
1,008,844	+		Pf6N2E2_860	0.75	+0.8
1,008,940	-		Pf6N2E2_860	0.82	+0.8
1,008,940	-		Pf6N2E2_860	0.82	-0.2
1,008,940	-		Pf6N2E2_860	0.82	+0.8
1,008,998	+		Pf6N2E2_860	0.85	+0.8
1,008,999	-		Pf6N2E2_860	0.85	+0.8
1,009,078	+				+0.8
1,009,079	-				+0.8
1,009,266	-				+0.8
1,009,292	+				-0.2
1,009,292	+				+0.8
1,009,293	-				+0.8
1,009,293	-				+0.8
1,009,293	-				-0.2
1,009,293	-				-0.2
1,009,315	+				-1.4
1,009,339	+				+0.8
1,009,432	+				-1.2
1,009,485	+		Pf6N2E2_861	0.13	+0.8
1,009,699	+		Pf6N2E2_861	0.34	+0.8
1,009,699	+		Pf6N2E2_861	0.34	+0.8
1,009,710	+		Pf6N2E2_861	0.35	-0.6
1,009,710	+		Pf6N2E2_861	0.35	-0.2
1,009,907	-		Pf6N2E2_861	0.55	+0.8
1,009,930	+		Pf6N2E2_861	0.57	-0.2
1,009,931	-		Pf6N2E2_861	0.57	-1.0
1,009,955	+		Pf6N2E2_861	0.59	+0.8
1,009,956	-		Pf6N2E2_861	0.59	+0.8
1,010,002	+		Pf6N2E2_861	0.64	+0.8
1,010,083	+		Pf6N2E2_861	0.72	+0.8
1,010,084	-		Pf6N2E2_861	0.72	+0.8
1,010,086	+		Pf6N2E2_861	0.72	-2.1