Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6006

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
6,822,559	-				-0.0
6,822,584	-				-2.3
6,822,592	+				-0.0
6,822,593	-				-0.0
6,822,593	-				-0.0
6,822,593	-				+1.0
6,822,593	-				+1.0
6,822,593	-				-0.5
6,822,593	-				+1.0
6,822,634	+				+1.0
6,822,635	-				-0.6
6,822,635	-				+1.0
6,822,713	+				+1.0
6,822,714	-				+1.0
6,822,714	-				-0.0
6,822,714	-				+1.0
6,822,714	-				-0.0
6,822,715	+				-0.0
6,822,715	+				+1.0
6,822,716	-				+1.0
6,823,114	-				-0.6
6,823,122	+				+1.0
6,823,156	+				+1.3
6,823,156	+				-0.0
6,823,156	+				+1.0
6,823,156	+				+1.0
6,823,157	-				-0.6
6,823,157	-				+1.3
6,823,157	-				-0.0
6,823,287	+				+1.0
6,823,288	-				+1.0
6,823,291	+				+1.0
6,823,291	+				+1.0
6,823,291	+				+1.0
6,823,465	-		Pf6N2E2_6006	0.29	+1.0
6,823,465	-		Pf6N2E2_6006	0.29	+0.2
6,823,465	-		Pf6N2E2_6006	0.29	+0.3
6,823,556	+		Pf6N2E2_6006	0.45	+2.0
6,823,556	+		Pf6N2E2_6006	0.45	+1.0
6,823,556	+		Pf6N2E2_6006	0.45	-0.0
6,823,557	-		Pf6N2E2_6006	0.45	-0.0
6,823,557	-		Pf6N2E2_6006	0.45	+1.0
6,823,684	+		Pf6N2E2_6006	0.68	+1.0
6,823,684	+		Pf6N2E2_6006	0.68	+1.0
6,823,684	+		Pf6N2E2_6006	0.68	+1.0
6,823,792	+		Pf6N2E2_6006	0.87	+1.0
6,823,793	-		Pf6N2E2_6006	0.87	-0.0
6,823,852	-				-0.0
6,823,863	+				-1.3
6,823,863	+				+1.0
6,823,947	+				+1.0
6,823,948	-				-0.0
6,823,990	+				-0.0
6,824,055	-				-0.0
6,824,165	+				-0.4
6,824,170	-				+1.0
6,824,193	-				+1.0
6,824,199	+				+1.0
6,824,232	+				-0.0
6,824,446	+		Pf6N2E2_6007	0.27	+1.0
6,824,446	+		Pf6N2E2_6007	0.27	+1.0
6,824,446	+		Pf6N2E2_6007	0.27	-0.0
6,824,446	+		Pf6N2E2_6007	0.27	-1.9
6,824,447	-		Pf6N2E2_6007	0.27	-0.6
6,824,447	-		Pf6N2E2_6007	0.27	+1.0
6,824,644	-		Pf6N2E2_6007	0.63	+1.0
6,824,783	-		Pf6N2E2_6007	0.88	+0.2