Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5782

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
6,600,750	+		Pf6N2E2_5781	0.31	+1.0
6,600,750	+		Pf6N2E2_5781	0.31	+1.0
6,600,750	+		Pf6N2E2_5781	0.31	+1.0
6,600,750	+		Pf6N2E2_5781	0.31	-1.4
6,600,750	+		Pf6N2E2_5781	0.31	+1.0
6,600,750	+		Pf6N2E2_5781	0.31	+0.6
6,600,750	+		Pf6N2E2_5781	0.31	-0.8
6,600,750	+		Pf6N2E2_5781	0.31	-0.9
6,600,751	-		Pf6N2E2_5781	0.31	+1.0
6,600,751	-		Pf6N2E2_5781	0.31	-0.6
6,600,751	-		Pf6N2E2_5781	0.31	+1.0
6,600,751	-		Pf6N2E2_5781	0.31	-1.1
6,600,751	-		Pf6N2E2_5781	0.31	+1.0
6,600,806	+		Pf6N2E2_5781	0.37	-0.0
6,600,864	+		Pf6N2E2_5781	0.43	+1.0
6,600,971	+		Pf6N2E2_5781	0.54	+1.0
6,600,971	+		Pf6N2E2_5781	0.54	+1.0
6,601,005	+		Pf6N2E2_5781	0.57	+0.5
6,601,005	+		Pf6N2E2_5781	0.57	-0.6
6,601,080	-		Pf6N2E2_5781	0.65	+1.0
6,601,189	+		Pf6N2E2_5781	0.77	-0.4
6,601,427	+				-1.9
6,601,485	+				-0.6
6,601,485	+				-0.0
6,601,486	-				-1.3
6,601,486	-				-0.6
6,601,488	+				+1.0
6,601,488	+				+1.0
6,601,489	-				-0.7
6,601,528	+				-0.0
6,601,529	-				+1.0
6,601,533	-				-0.4
6,601,533	-				-0.5
6,601,538	+				-0.2
6,601,539	-				-0.0
6,601,560	+				-1.4
6,601,560	+				+1.0
6,601,560	+				-1.0
6,601,561	-				+1.0
6,601,561	-				+0.3
6,601,561	-				+1.0
6,601,561	-				+1.0
6,601,584	+				+1.0
6,601,584	+				-0.8
6,601,584	+				+1.0
6,601,585	-				+0.1
6,601,604	+				-0.5
6,601,604	+				-1.0
6,601,604	+				+1.0
6,601,604	+				-2.0
6,601,604	+				-0.0
6,601,604	+				+1.0
6,601,604	+				+1.0
6,601,604	+				+1.0
6,601,604	+				-0.0
6,601,604	+				+0.2
6,601,604	+				+1.0
6,601,604	+				+1.0
6,601,604	+				+1.0
6,601,604	+				+1.0
6,601,605	-				-0.0
6,601,605	-				-1.1
6,601,605	-				-0.0
6,601,605	-				-0.6
6,601,605	-				-0.7
6,601,605	-				-1.7
6,601,605	-				-0.0
6,601,605	-				-0.0
6,601,605	-				+1.0
6,601,605	-				-0.0
6,601,605	-				+1.0
6,601,605	-				-0.6
6,601,605	-				+1.0
6,601,605	-				-0.6
6,601,605	-				-1.5
6,601,605	-				-0.0
6,601,605	-				-0.0
6,601,621	-				-0.5
6,601,654	+				-0.0
6,601,682	+				+1.0
6,601,682	+				+1.0
6,601,682	+				-0.9
6,601,682	+				-0.6
6,601,682	+				+1.0
6,601,682	+				-0.0
6,601,682	+				-0.2
6,601,682	+				+0.1
6,601,683	-				+1.0
6,601,683	-				-0.0
6,601,683	-				+1.4
6,601,683	-				-0.0
6,601,683	-				+1.0
6,601,683	-				-0.4
6,601,683	-				-0.9
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.4
6,601,724	+		Pf6N2E2_5782	0.24	-1.0
6,601,724	+		Pf6N2E2_5782	0.24	-2.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	-1.0
6,601,724	+		Pf6N2E2_5782	0.24	+1.0
6,601,724	+		Pf6N2E2_5782	0.24	-1.2
6,601,725	-		Pf6N2E2_5782	0.25	-1.3
6,601,725	-		Pf6N2E2_5782	0.25	-0.6
6,601,725	-		Pf6N2E2_5782	0.25	+2.0
6,601,725	-		Pf6N2E2_5782	0.25	-0.6
6,601,725	-		Pf6N2E2_5782	0.25	+1.0
6,601,725	-		Pf6N2E2_5782	0.25	+1.0
6,601,725	-		Pf6N2E2_5782	0.25	+1.0
6,601,725	-		Pf6N2E2_5782	0.25	-0.0
6,601,725	-		Pf6N2E2_5782	0.25	-1.4
6,601,725	-		Pf6N2E2_5782	0.25	-0.6
6,601,726	+		Pf6N2E2_5782	0.25	+1.0
6,601,727	-		Pf6N2E2_5782	0.26	+1.0
6,601,784	+		Pf6N2E2_5782	0.51	-0.6
6,601,785	-		Pf6N2E2_5782	0.52	-0.0
6,601,889	+				-0.9
6,601,889	+				+1.0
6,601,890	-				+1.0
6,601,890	-				+1.0
6,601,890	-				-0.8
6,602,030	+				+1.0
6,602,030	+				-0.0
6,602,048	+				+0.1
6,602,048	+				+1.0
6,602,048	+				-0.6
6,602,048	+				-0.0
6,602,048	+				+1.0
6,602,048	+				-0.0
6,602,048	+				-1.4
6,602,048	+				+1.0
6,602,048	+				+1.0
6,602,048	+				+1.0
6,602,048	+				-0.5
6,602,048	+				+1.0
6,602,048	+				-0.6
6,602,049	-				-1.4
6,602,049	-				-0.0
6,602,049	-				-0.0
6,602,049	-				+1.0
6,602,049	-				-0.9
6,602,049	-				-0.0
6,602,049	-				+1.0
6,602,049	-				-0.0
6,602,049	-				-0.4
6,602,049	-				-0.0
6,602,049	-				-0.6
6,602,049	-				-1.0
6,602,049	-				+1.0
6,602,049	-				+1.0
6,602,049	-				+1.0
6,602,049	-				-1.0
6,602,049	-				+1.0
6,602,049	-				+1.0
6,602,049	-				-0.0
6,602,126	+				-0.6
6,602,127	-				+1.0
6,602,127	-				+1.0
6,602,138	+				+1.0
6,602,305	+				-0.4
6,602,306	-				+1.0
6,602,310	-				-0.9
6,602,310	-				-1.0