Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5506

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
6,322,923	+		Pf6N2E2_5504	0.65	+1.0
6,322,923	+		Pf6N2E2_5504	0.65	-0.3
6,322,923	+		Pf6N2E2_5504	0.65	-0.9
6,322,923	+		Pf6N2E2_5504	0.65	-0.6
6,322,924	-		Pf6N2E2_5504	0.65	+1.0
6,322,924	-		Pf6N2E2_5504	0.65	-2.2
6,322,924	-		Pf6N2E2_5504	0.65	+1.0
6,322,924	-		Pf6N2E2_5504	0.65	-0.0
6,322,924	-		Pf6N2E2_5504	0.65	+1.0
6,322,924	-		Pf6N2E2_5504	0.65	+1.0
6,323,025	-		Pf6N2E2_5504	0.79	-0.0
6,323,226	+		Pf6N2E2_5505	0.29	+1.0
6,323,226	+		Pf6N2E2_5505	0.29	-1.8
6,323,251	+		Pf6N2E2_5505	0.49	-0.6
6,323,310	+				-2.3
6,323,310	+				+1.0
6,323,310	+				+1.0
6,323,311	-				-1.1
6,323,311	-				-0.0
6,323,401	-				-0.0
6,323,401	-				+1.0
6,323,458	+				-0.7
6,323,459	-				-1.2
6,323,560	+				+1.0
6,323,560	+				-0.7
6,323,845	+		Pf6N2E2_5506	0.29	+1.0
6,323,895	-		Pf6N2E2_5506	0.32	+1.0
6,324,096	+		Pf6N2E2_5506	0.46	-0.0
6,324,096	+		Pf6N2E2_5506	0.46	+1.0
6,324,097	-		Pf6N2E2_5506	0.46	-0.0
6,324,127	+		Pf6N2E2_5506	0.48	-1.3
6,324,128	-		Pf6N2E2_5506	0.48	-0.0
6,324,128	-		Pf6N2E2_5506	0.48	+1.0
6,324,186	-		Pf6N2E2_5506	0.52	+1.0
6,324,186	-		Pf6N2E2_5506	0.52	-1.0
6,324,253	+		Pf6N2E2_5506	0.57	-0.6
6,324,253	+		Pf6N2E2_5506	0.57	+1.0
6,324,253	+		Pf6N2E2_5506	0.57	-1.0
6,324,253	+		Pf6N2E2_5506	0.57	-0.0
6,324,254	-		Pf6N2E2_5506	0.57	+0.1
6,324,254	-		Pf6N2E2_5506	0.57	-0.9
6,324,254	-		Pf6N2E2_5506	0.57	+1.0
6,324,254	-		Pf6N2E2_5506	0.57	-0.0
6,324,254	-		Pf6N2E2_5506	0.57	+1.0
6,324,254	-		Pf6N2E2_5506	0.57	+1.0
6,324,256	-		Pf6N2E2_5506	0.57	-1.2
6,324,307	-		Pf6N2E2_5506	0.61	-0.0
6,324,394	+		Pf6N2E2_5506	0.67	-0.0
6,324,395	-		Pf6N2E2_5506	0.67	+1.0
6,324,456	+		Pf6N2E2_5506	0.71	-0.5
6,324,456	+		Pf6N2E2_5506	0.71	+1.0
6,324,456	+		Pf6N2E2_5506	0.71	-0.0
6,324,457	-		Pf6N2E2_5506	0.71	-0.0
6,324,457	-		Pf6N2E2_5506	0.71	+1.0
6,324,460	+		Pf6N2E2_5506	0.71	+1.0
6,324,506	+		Pf6N2E2_5506	0.75	-0.0
6,324,506	+		Pf6N2E2_5506	0.75	-0.8
6,324,507	-		Pf6N2E2_5506	0.75	+1.0
6,324,507	-		Pf6N2E2_5506	0.75	-1.0
6,324,507	-		Pf6N2E2_5506	0.75	+1.0
6,324,508	+		Pf6N2E2_5506	0.75	-0.8
6,324,542	+		Pf6N2E2_5506	0.77	-0.6
6,324,542	+		Pf6N2E2_5506	0.77	-0.0
6,324,543	-		Pf6N2E2_5506	0.77	+1.0
6,324,543	-		Pf6N2E2_5506	0.77	+1.0
6,324,624	-		Pf6N2E2_5506	0.83	-2.2
6,324,624	-		Pf6N2E2_5506	0.83	+1.0
6,324,624	-		Pf6N2E2_5506	0.83	-0.0
6,324,738	+				+0.6
6,324,738	+				-0.0
6,324,738	+				+1.0
6,324,739	-				+1.0
6,324,786	+				-0.5
6,324,807	-				+1.0
6,325,379	-				+1.0
6,325,382	-				+1.0
6,325,503	+				+1.0
6,325,503	+				-1.8
6,325,505	+				+1.0
6,325,505	+				+1.0
6,325,505	+				+1.0
6,325,506	-				+1.0
6,325,506	-				-0.0
6,325,506	-				-0.0
6,325,598	+				+1.0