Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4940

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
5,695,451	+		Pf6N2E2_4939	0.80	-0.5
5,695,452	-		Pf6N2E2_4939	0.80	+0.1
5,695,452	-		Pf6N2E2_4939	0.80	+1.1
5,695,452	-		Pf6N2E2_4939	0.80	-0.5
5,695,452	-		Pf6N2E2_4939	0.80	+0.1
5,695,452	-		Pf6N2E2_4939	0.80	+1.1
5,695,802	+		Pf6N2E2_4939	0.87	+1.1
5,696,024	+				-0.5
5,696,024	+				+1.1
5,696,025	-				-0.5
5,696,025	-				-0.5
5,696,207	+				+0.1
5,696,207	+				+1.1
5,696,208	-				+1.1
5,696,208	-				-0.9
5,696,208	-				+0.1
5,696,315	+				+0.5
5,696,316	-				+1.1
5,696,316	-				+0.1
5,696,565	+		Pf6N2E2_4940	0.11	-0.9
5,696,565	+		Pf6N2E2_4940	0.11	-0.5
5,696,566	-		Pf6N2E2_4940	0.12	-0.5
5,696,604	+		Pf6N2E2_4940	0.14	+1.1
5,696,604	+		Pf6N2E2_4940	0.14	-1.0
5,696,604	+		Pf6N2E2_4940	0.14	+1.1
5,696,605	-		Pf6N2E2_4940	0.14	-0.5
5,696,605	-		Pf6N2E2_4940	0.14	-0.9
5,696,605	-		Pf6N2E2_4940	0.14	-0.9
5,696,605	-		Pf6N2E2_4940	0.14	+0.1
5,696,605	-		Pf6N2E2_4940	0.14	+0.1
5,696,605	-		Pf6N2E2_4940	0.14	-0.3
5,696,637	+		Pf6N2E2_4940	0.16	-2.3
5,696,637	+		Pf6N2E2_4940	0.16	-0.7
5,696,637	+		Pf6N2E2_4940	0.16	+1.1
5,696,637	+		Pf6N2E2_4940	0.16	-0.9
5,696,637	+		Pf6N2E2_4940	0.16	+1.1
5,696,638	-		Pf6N2E2_4940	0.16	+1.1
5,696,638	-		Pf6N2E2_4940	0.16	+0.6
5,696,638	-		Pf6N2E2_4940	0.16	+0.1
5,696,638	-		Pf6N2E2_4940	0.16	+1.1
5,696,638	-		Pf6N2E2_4940	0.16	-0.6
5,696,638	-		Pf6N2E2_4940	0.16	+1.1
5,696,638	-		Pf6N2E2_4940	0.16	+0.1
5,696,700	+		Pf6N2E2_4940	0.20	+0.1
5,696,700	+		Pf6N2E2_4940	0.20	-0.9
5,696,700	+		Pf6N2E2_4940	0.20	+0.1
5,696,749	-		Pf6N2E2_4940	0.23	+1.1
5,697,076	-		Pf6N2E2_4940	0.43	-0.7
5,697,324	+		Pf6N2E2_4940	0.58	+0.5
5,697,324	+		Pf6N2E2_4940	0.58	-0.5
5,697,325	-		Pf6N2E2_4940	0.58	+0.1
5,697,325	-		Pf6N2E2_4940	0.58	-1.9
5,697,325	-		Pf6N2E2_4940	0.58	+0.1
5,697,405	+		Pf6N2E2_4940	0.63	+1.1
5,697,406	-		Pf6N2E2_4940	0.63	+1.1
5,697,406	-		Pf6N2E2_4940	0.63	-0.9
5,697,406	-		Pf6N2E2_4940	0.63	+1.1
5,697,406	-		Pf6N2E2_4940	0.63	+0.1
5,697,558	+		Pf6N2E2_4940	0.73	+0.1
5,697,558	+		Pf6N2E2_4940	0.73	+1.1
5,697,559	-		Pf6N2E2_4940	0.73	-0.6
5,697,783	+		Pf6N2E2_4940	0.87	-1.3
5,697,783	+		Pf6N2E2_4940	0.87	+0.1
5,697,783	+		Pf6N2E2_4940	0.87	+1.1
5,697,784	-		Pf6N2E2_4940	0.87	+1.1
5,697,834	+		Pf6N2E2_4940	0.90	-1.3
5,697,834	+		Pf6N2E2_4940	0.90	+0.1
5,697,834	+		Pf6N2E2_4940	0.90	+0.1
5,697,835	-		Pf6N2E2_4940	0.90	-1.3
5,697,835	-		Pf6N2E2_4940	0.90	+0.1
5,697,835	-		Pf6N2E2_4940	0.90	+1.1
5,697,862	-				+0.1
5,697,862	-				-1.9
5,697,862	-				+1.1
5,697,912	+				+0.1
5,697,912	+				-0.5
5,697,912	+				+0.1
5,697,912	+				+1.1
5,697,913	-				-1.5
5,697,913	-				+0.1
5,697,960	+				-1.9
5,697,960	+				-0.3
5,697,961	-				+1.1
5,697,961	-				-0.8
5,697,961	-				+0.1
5,697,997	-				+1.1
5,697,997	-				-1.4
5,697,997	-				-0.8
5,698,181	+		Pf6N2E2_4941	0.22	+0.1
5,698,203	-		Pf6N2E2_4941	0.24	+1.1
5,698,358	-		Pf6N2E2_4941	0.43	-1.4
5,698,358	-		Pf6N2E2_4941	0.43	+1.1
5,698,358	-		Pf6N2E2_4941	0.43	+0.1
5,698,358	-		Pf6N2E2_4941	0.43	+0.1
5,698,358	-		Pf6N2E2_4941	0.43	-0.9
5,698,615	-		Pf6N2E2_4941	0.74	-0.5
5,698,615	-		Pf6N2E2_4941	0.74	-0.3
5,698,623	+		Pf6N2E2_4941	0.75	-1.0
5,698,623	+		Pf6N2E2_4941	0.75	-1.3
5,698,623	+		Pf6N2E2_4941	0.75	+0.1
5,698,623	+		Pf6N2E2_4941	0.75	+0.1
5,698,623	+		Pf6N2E2_4941	0.75	+0.1
5,698,623	+		Pf6N2E2_4941	0.75	-0.5
5,698,623	+		Pf6N2E2_4941	0.75	-0.5
5,698,623	+		Pf6N2E2_4941	0.75	-0.3
5,698,623	+		Pf6N2E2_4941	0.75	-1.1
5,698,624	-		Pf6N2E2_4941	0.75	-0.5
5,698,624	-		Pf6N2E2_4941	0.75	+0.1
5,698,624	-		Pf6N2E2_4941	0.75	+0.1
5,698,624	-		Pf6N2E2_4941	0.75	+1.1
5,698,624	-		Pf6N2E2_4941	0.75	-0.9
5,698,624	-		Pf6N2E2_4941	0.75	+0.1
5,698,624	-		Pf6N2E2_4941	0.75	-0.6
5,698,624	-		Pf6N2E2_4941	0.75	+1.1
5,698,633	-		Pf6N2E2_4941	0.76	-1.7
5,698,633	-		Pf6N2E2_4941	0.76	-0.5
5,698,633	-		Pf6N2E2_4941	0.76	+0.1
5,698,633	-		Pf6N2E2_4941	0.76	-0.5
5,698,831	-				+1.1
5,698,914	+				+1.1
5,698,914	+				-0.9
5,698,915	-				+0.1
5,698,915	-				-0.5
5,698,915	-				-0.9
5,698,915	-				+1.1
5,698,923	+				+1.1
5,698,924	-				+0.1
5,698,924	-				+1.1