Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4570

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
5,300,380	+				+0.1
5,300,380	+				-0.5
5,300,398	+				-1.3
5,300,653	+		Pf6N2E2_4569	0.21	+0.1
5,300,653	+		Pf6N2E2_4569	0.21	+0.1
5,300,654	-		Pf6N2E2_4569	0.22	-0.9
5,300,654	-		Pf6N2E2_4569	0.22	+1.1
5,300,795	-		Pf6N2E2_4569	0.39	+0.1
5,300,988	+		Pf6N2E2_4569	0.63	+1.1
5,300,988	+		Pf6N2E2_4569	0.63	-0.5
5,300,989	-		Pf6N2E2_4569	0.63	+0.1
5,300,989	-		Pf6N2E2_4569	0.63	-0.1
5,300,989	-		Pf6N2E2_4569	0.63	+1.1
5,300,989	-		Pf6N2E2_4569	0.63	-0.1
5,300,989	-		Pf6N2E2_4569	0.63	+0.1
5,300,989	-		Pf6N2E2_4569	0.63	+1.1
5,300,992	+		Pf6N2E2_4569	0.63	-0.5
5,300,992	+		Pf6N2E2_4569	0.63	-0.9
5,300,992	+		Pf6N2E2_4569	0.63	-0.5
5,300,992	+		Pf6N2E2_4569	0.63	-0.9
5,300,993	-		Pf6N2E2_4569	0.63	+0.1
5,301,167	-		Pf6N2E2_4569	0.85	-1.0
5,301,306	+				+1.1
5,301,306	+				+0.4
5,301,307	-				+1.1
5,301,307	-				-1.5
5,301,307	-				+1.1
5,301,307	-				+0.1
5,301,307	-				-0.5
5,301,308	+				+1.1
5,301,315	+				+1.1
5,301,315	+				-1.7
5,301,315	+				+1.1
5,301,315	+				-0.6
5,301,315	+				+1.1
5,301,315	+				-0.1
5,301,315	+				-0.3
5,301,315	+				+1.1
5,301,316	-				+1.1
5,301,316	-				-1.0
5,301,316	-				-0.6
5,301,318	+				+1.1
5,301,326	+				-0.9
5,301,327	-				+1.1
5,301,432	-		Pf6N2E2_4570	0.27	+1.1
5,301,531	+		Pf6N2E2_4570	0.58	+1.1
5,301,531	+		Pf6N2E2_4570	0.58	-2.8
5,301,635	-				+1.1
5,301,753	+				-0.4
5,301,753	+				+0.1
5,301,753	+				+0.1
5,301,754	-				+1.1
5,301,754	-				-0.5
5,301,754	-				+1.1
5,301,811	+				-0.5
5,301,812	-				+0.1
5,301,818	+				-1.0
5,301,818	+				+1.1
5,301,818	+				+0.1
5,301,819	-				+1.1
5,301,819	-				+0.1
5,301,819	-				+1.1
5,302,218	-				-0.3