Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4222

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
4,911,169	+		Pf6N2E2_4220	0.53	-0.6
4,911,169	+		Pf6N2E2_4220	0.53	-0.4
4,911,169	+		Pf6N2E2_4220	0.53	-0.4
4,911,169	+		Pf6N2E2_4220	0.53	-0.9
4,911,170	-		Pf6N2E2_4220	0.54	-0.9
4,911,170	-		Pf6N2E2_4220	0.54	-1.2
4,911,170	-		Pf6N2E2_4220	0.54	+1.1
4,911,170	-		Pf6N2E2_4220	0.54	-0.9
4,911,170	-		Pf6N2E2_4220	0.54	-0.9
4,911,170	-		Pf6N2E2_4220	0.54	-0.4
4,911,170	-		Pf6N2E2_4220	0.54	+1.1
4,911,208	+		Pf6N2E2_4220	0.60	-0.4
4,911,208	+		Pf6N2E2_4220	0.60	+1.1
4,911,208	+		Pf6N2E2_4220	0.60	-0.4
4,911,209	-		Pf6N2E2_4220	0.60	-0.4
4,911,223	+		Pf6N2E2_4220	0.63	+0.1
4,911,223	+		Pf6N2E2_4220	0.63	+0.1
4,911,223	+		Pf6N2E2_4220	0.63	+0.1
4,911,223	+		Pf6N2E2_4220	0.63	+1.1
4,911,224	-		Pf6N2E2_4220	0.63	+1.1
4,911,224	-		Pf6N2E2_4220	0.63	+1.1
4,911,224	-		Pf6N2E2_4220	0.63	+0.1
4,911,224	-		Pf6N2E2_4220	0.63	+1.1
4,911,224	-		Pf6N2E2_4220	0.63	+0.1
4,911,224	-		Pf6N2E2_4220	0.63	-0.4
4,911,224	-		Pf6N2E2_4220	0.63	+0.1
4,911,224	-		Pf6N2E2_4220	0.63	+0.3
4,911,224	-		Pf6N2E2_4220	0.63	-0.4
4,911,224	-		Pf6N2E2_4220	0.63	+1.1
4,911,224	-		Pf6N2E2_4220	0.63	+0.1
4,911,224	-		Pf6N2E2_4220	0.63	-1.2
4,911,224	-		Pf6N2E2_4220	0.63	+0.1
4,911,224	-		Pf6N2E2_4220	0.63	-1.0
4,911,342	+		Pf6N2E2_4220	0.84	+1.1
4,911,342	+		Pf6N2E2_4220	0.84	-0.9
4,911,342	+		Pf6N2E2_4220	0.84	+0.1
4,911,342	+		Pf6N2E2_4220	0.84	+0.1
4,911,342	+		Pf6N2E2_4220	0.84	+0.5
4,911,342	+		Pf6N2E2_4220	0.84	-0.4
4,911,342	+		Pf6N2E2_4220	0.84	-0.4
4,911,342	+		Pf6N2E2_4220	0.84	+0.1
4,911,342	+		Pf6N2E2_4220	0.84	-0.8
4,911,342	+		Pf6N2E2_4220	0.84	+1.1
4,911,342	+		Pf6N2E2_4220	0.84	-0.9
4,911,343	-		Pf6N2E2_4220	0.84	-0.8
4,911,343	-		Pf6N2E2_4220	0.84	+0.1
4,911,343	-		Pf6N2E2_4220	0.84	+0.1
4,911,343	-		Pf6N2E2_4220	0.84	+1.1
4,911,343	-		Pf6N2E2_4220	0.84	-0.4
4,911,343	-		Pf6N2E2_4220	0.84	-0.6
4,911,376	+		Pf6N2E2_4220	0.89	-0.4
4,911,376	+		Pf6N2E2_4220	0.89	-1.0
4,911,376	+		Pf6N2E2_4220	0.89	+0.1
4,911,377	-		Pf6N2E2_4220	0.90	+1.1
4,911,377	-		Pf6N2E2_4220	0.90	-0.9
4,911,385	-				-0.9
4,911,413	+				+1.1
4,911,414	-				+1.1
4,911,414	-				-0.5
4,911,414	-				-1.5
4,911,414	-				-0.4
4,911,453	+				+1.1
4,911,453	+				+1.1
4,911,454	-				+1.1
4,911,454	-				-0.4
4,911,529	+		Pf6N2E2_4221	0.24	-0.4
4,911,530	-		Pf6N2E2_4221	0.24	+0.1
4,911,543	+		Pf6N2E2_4221	0.28	-1.4
4,911,543	+		Pf6N2E2_4221	0.28	-0.4
4,911,543	+		Pf6N2E2_4221	0.28	-0.1
4,911,543	+		Pf6N2E2_4221	0.28	+0.3
4,911,543	+		Pf6N2E2_4221	0.28	+0.1
4,911,543	+		Pf6N2E2_4221	0.28	-0.4
4,911,543	+		Pf6N2E2_4221	0.28	-0.4
4,911,543	+		Pf6N2E2_4221	0.28	-2.2
4,911,543	+		Pf6N2E2_4221	0.28	+0.1
4,911,544	-		Pf6N2E2_4221	0.28	-0.7
4,911,544	-		Pf6N2E2_4221	0.28	+0.1
4,911,544	-		Pf6N2E2_4221	0.28	+0.0
4,911,544	-		Pf6N2E2_4221	0.28	+0.1
4,911,544	-		Pf6N2E2_4221	0.28	-0.1
4,911,544	-		Pf6N2E2_4221	0.28	+0.1
4,911,544	-		Pf6N2E2_4221	0.28	-0.9
4,911,544	-		Pf6N2E2_4221	0.28	+1.1
4,911,549	+		Pf6N2E2_4221	0.30	-0.7
4,911,549	+		Pf6N2E2_4221	0.30	-0.6
4,911,550	-		Pf6N2E2_4221	0.30	-0.9
4,911,550	-		Pf6N2E2_4221	0.30	-2.2
4,911,550	-		Pf6N2E2_4221	0.30	-1.0
4,911,550	-		Pf6N2E2_4221	0.30	+0.1
4,911,608	+		Pf6N2E2_4221	0.48	+1.1
4,911,608	+		Pf6N2E2_4221	0.48	-2.0
4,911,645	+		Pf6N2E2_4221	0.60	-0.8
4,911,646	-		Pf6N2E2_4221	0.60	+0.1
4,911,646	-		Pf6N2E2_4221	0.60	+0.1
4,911,646	-		Pf6N2E2_4221	0.60	+1.1
4,911,646	-		Pf6N2E2_4221	0.60	-1.7
4,911,646	-		Pf6N2E2_4221	0.60	+0.1
4,911,650	-		Pf6N2E2_4221	0.61	+0.1
4,911,650	-		Pf6N2E2_4221	0.61	-0.4
4,911,740	+		Pf6N2E2_4221	0.89	+1.1
4,911,741	-		Pf6N2E2_4221	0.89	+0.1
4,911,741	-		Pf6N2E2_4221	0.89	-0.4
4,911,810	+				+1.1
4,911,810	+				+1.0
4,911,811	-				+0.1
4,911,811	-				+1.1
4,911,811	-				+0.1
4,911,842	-				+0.1
4,911,856	+				+1.1
4,911,856	+				+1.1
4,911,856	+				+0.1
4,911,856	+				+1.1
4,911,856	+				-0.2
4,911,857	-				+0.1
4,911,857	-				-0.9
4,911,857	-				-0.1
4,911,857	-				-0.4
4,911,857	-				-1.3
4,911,857	-				-0.4
4,911,978	-				+0.1
4,911,984	+				-0.5
4,911,984	+				-0.9
4,912,060	-				+0.1
4,912,083	-				+1.1
4,912,132	+		Pf6N2E2_4222	0.17	-0.7
4,912,132	+		Pf6N2E2_4222	0.17	-0.9
4,912,132	+		Pf6N2E2_4222	0.17	-0.4
4,912,133	-		Pf6N2E2_4222	0.17	-2.2
4,912,258	+		Pf6N2E2_4222	0.36	-1.2
4,912,258	+		Pf6N2E2_4222	0.36	-2.6
4,912,259	-		Pf6N2E2_4222	0.36	-1.9
4,912,262	+		Pf6N2E2_4222	0.36	-0.7
4,912,262	+		Pf6N2E2_4222	0.36	-1.4
4,912,262	+		Pf6N2E2_4222	0.36	-1.1
4,912,262	+		Pf6N2E2_4222	0.36	-0.1
4,912,262	+		Pf6N2E2_4222	0.36	-0.9
4,912,262	+		Pf6N2E2_4222	0.36	+0.1
4,912,263	-		Pf6N2E2_4222	0.36	-0.9
4,912,263	-		Pf6N2E2_4222	0.36	-1.9
4,912,263	-		Pf6N2E2_4222	0.36	+1.1
4,912,286	+		Pf6N2E2_4222	0.40	+0.4
4,912,287	-		Pf6N2E2_4222	0.40	-0.9
4,912,287	-		Pf6N2E2_4222	0.40	-0.7
4,912,287	-		Pf6N2E2_4222	0.40	-2.3
4,912,316	+		Pf6N2E2_4222	0.44	+0.1
4,912,317	-		Pf6N2E2_4222	0.44	-0.9
4,912,317	-		Pf6N2E2_4222	0.44	+0.1
4,912,326	+		Pf6N2E2_4222	0.45	-1.1
4,912,326	+		Pf6N2E2_4222	0.45	-1.2
4,912,327	-		Pf6N2E2_4222	0.46	+1.1
4,912,327	-		Pf6N2E2_4222	0.46	-0.9
4,912,327	-		Pf6N2E2_4222	0.46	+0.1
4,912,608	+		Pf6N2E2_4222	0.87	+1.1
4,912,608	+		Pf6N2E2_4222	0.87	-0.9
4,912,608	+		Pf6N2E2_4222	0.87	+1.1
4,912,608	+		Pf6N2E2_4222	0.87	-1.9
4,912,608	+		Pf6N2E2_4222	0.87	+0.0
4,912,608	+		Pf6N2E2_4222	0.87	+1.1
4,912,609	-		Pf6N2E2_4222	0.87	+1.1
4,912,609	-		Pf6N2E2_4222	0.87	-1.4
4,912,609	-		Pf6N2E2_4222	0.87	-0.4
4,912,638	+				+1.1
4,912,639	-				+0.1
4,912,639	-				-0.1
4,912,693	+				+0.1
4,912,693	+				+1.1
4,912,693	+				+0.7
4,912,693	+				+1.1
4,912,693	+				-1.9
4,912,693	+				+1.1
4,912,693	+				-1.2
4,912,694	-				+0.1
4,912,698	+				+0.1
4,912,698	+				-0.4
4,912,698	+				+0.1
4,912,699	-				-0.7
4,912,699	-				-0.7
4,912,736	+				+1.1
4,912,736	+				-1.2
4,912,736	+				-2.4
4,912,736	+				+0.1
4,912,737	-				+1.1
4,912,737	-				+1.1
4,912,737	-				-0.6
4,912,737	-				-0.4
4,912,737	-				+0.1
4,912,783	+				-0.9
4,912,922	-				+0.6
4,912,922	-				+0.1
4,912,922	-				+0.1
4,912,929	+				+1.1
4,912,929	+				+0.1
4,912,929	+				-1.2
4,912,929	+				-0.4
4,912,929	+				-1.3
4,912,929	+				-1.2
4,912,929	+				-0.4
4,912,929	+				+1.1
4,912,929	+				-1.1
4,912,929	+				-0.9
4,912,929	+				-1.3
4,912,929	+				-0.4
4,912,929	+				+1.1
4,912,929	+				-0.4
4,912,929	+				-1.9
4,912,929	+				-0.9
4,912,930	-				+1.1
4,912,930	-				+0.1
4,912,930	-				+1.1
4,912,930	-				+1.1
4,912,930	-				-0.7
4,912,930	-				-0.9
4,912,930	-				-0.2
4,912,930	-				-0.4
4,912,930	-				+0.1
4,912,930	-				+1.1
4,912,930	-				-0.4
4,912,930	-				-0.9
4,912,959	+				+1.1
4,912,959	+				-1.9
4,912,959	+				+0.1
4,912,959	+				+0.7
4,912,959	+				-0.4
4,912,959	+				+0.1
4,912,959	+				+0.7
4,912,960	-				-0.3
4,912,960	-				-1.2
4,912,960	-				-0.8
4,912,960	-				+0.1
4,912,961	+				+1.1
4,912,961	+				+1.1
4,912,961	+				+1.1
4,912,961	+				+1.1
4,912,962	-				+1.1
4,912,962	-				-0.3
4,912,962	-				-0.8
4,912,962	-				-0.4
4,912,962	-				-0.5
4,912,962	-				+0.1
4,912,962	-				+1.1
4,912,962	-				+0.1
4,912,977	+				+0.1
4,912,977	+				-0.8
4,912,977	+				+2.1
4,912,978	-				+0.1
4,912,990	-				+1.1
4,912,990	-				+1.1
4,913,023	+				+0.1