Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4053

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
4,731,256	+		Pf6N2E2_4050	0.28	-0.6
4,731,308	-		Pf6N2E2_4050	0.44	+0.8
4,731,308	-		Pf6N2E2_4050	0.44	+0.1
4,731,380	+		Pf6N2E2_4050	0.66	-0.9
4,731,562	-				-0.8
4,731,597	+				+1.1
4,731,597	+				+0.1
4,731,597	+				+1.1
4,731,597	+				-0.6
4,731,597	+				+1.1
4,731,597	+				+1.1
4,731,597	+				+1.1
4,731,597	+				-2.1
4,731,597	+				-0.9
4,731,597	+				-1.5
4,731,597	+				+0.1
4,731,597	+				+1.1
4,731,598	-				-1.2
4,731,598	-				-1.9
4,731,598	-				+1.1
4,731,598	-				-1.1
4,731,598	-				-0.5
4,731,616	+				-0.9
4,731,616	+				-0.5
4,731,616	+				+0.1
4,731,616	+				+0.1
4,731,617	-				+0.1
4,731,617	-				+1.1
4,731,617	-				+1.1
4,731,617	-				-0.9
4,731,617	-				+0.1
4,731,665	+				+0.2
4,731,666	-				-0.5
4,731,856	+				+1.1
4,731,856	+				-2.3
4,731,856	+				+0.1
4,731,856	+				+0.1
4,731,857	-				+1.1
4,731,857	-				-0.9
4,731,857	-				+0.1
4,731,857	-				+0.1
4,731,896	+				+1.1
4,731,914	+				-1.2
4,731,920	-				-0.2
4,731,920	-				-0.9
4,731,920	-				+1.1
4,731,941	+				-0.7
4,731,942	-				+1.1
4,731,994	+				+1.1
4,731,995	-				+1.1
4,732,153	+		Pf6N2E2_4052	0.79	-0.5
4,732,286	-				-0.5
4,732,286	-				+1.1
4,732,286	-				+0.1
4,732,286	-				-0.6
4,732,286	-				+0.1
4,732,312	+				-1.2
4,732,313	-				-1.2
4,732,526	-		Pf6N2E2_4053	0.27	+1.1
4,732,526	-		Pf6N2E2_4053	0.27	-0.5
4,732,526	-		Pf6N2E2_4053	0.27	-0.5
4,732,526	-		Pf6N2E2_4053	0.27	-0.5
4,732,543	+		Pf6N2E2_4053	0.29	+1.1
4,732,562	+		Pf6N2E2_4053	0.31	+0.1
4,732,597	+		Pf6N2E2_4053	0.34	+1.1
4,732,597	+		Pf6N2E2_4053	0.34	+1.1
4,732,597	+		Pf6N2E2_4053	0.34	+0.1
4,732,597	+		Pf6N2E2_4053	0.34	+1.1
4,732,597	+		Pf6N2E2_4053	0.34	+1.1
4,732,597	+		Pf6N2E2_4053	0.34	+0.1
4,732,597	+		Pf6N2E2_4053	0.34	+1.1
4,732,597	+		Pf6N2E2_4053	0.34	+0.1
4,732,597	+		Pf6N2E2_4053	0.34	+1.1
4,732,597	+		Pf6N2E2_4053	0.34	-0.5
4,732,597	+		Pf6N2E2_4053	0.34	-0.5
4,732,597	+		Pf6N2E2_4053	0.34	-0.7
4,732,597	+		Pf6N2E2_4053	0.34	-1.0
4,732,597	+		Pf6N2E2_4053	0.34	+0.1
4,732,597	+		Pf6N2E2_4053	0.34	+0.1
4,732,598	-		Pf6N2E2_4053	0.34	+1.1
4,732,598	-		Pf6N2E2_4053	0.34	+3.1
4,732,598	-		Pf6N2E2_4053	0.34	-0.8
4,732,598	-		Pf6N2E2_4053	0.34	+0.1
4,732,598	-		Pf6N2E2_4053	0.34	-0.5
4,732,598	-		Pf6N2E2_4053	0.34	-0.9
4,732,598	-		Pf6N2E2_4053	0.34	+0.1
4,732,598	-		Pf6N2E2_4053	0.34	-0.5
4,732,598	-		Pf6N2E2_4053	0.34	-0.9
4,732,598	-		Pf6N2E2_4053	0.34	-1.0
4,732,598	-		Pf6N2E2_4053	0.34	+0.5
4,732,598	-		Pf6N2E2_4053	0.34	-0.5
4,732,598	-		Pf6N2E2_4053	0.34	+1.1
4,732,598	-		Pf6N2E2_4053	0.34	+1.1
4,732,639	+		Pf6N2E2_4053	0.38	-0.8
4,732,663	+		Pf6N2E2_4053	0.41	-0.9
4,732,664	-		Pf6N2E2_4053	0.41	+1.1
4,732,664	-		Pf6N2E2_4053	0.41	+0.1
4,733,057	-		Pf6N2E2_4053	0.80	+0.1
4,733,057	-		Pf6N2E2_4053	0.80	+1.1
4,733,129	+		Pf6N2E2_4053	0.87	+1.1
4,733,129	+		Pf6N2E2_4053	0.87	-0.7
4,733,130	-		Pf6N2E2_4053	0.87	+1.7
4,733,132	-		Pf6N2E2_4053	0.88	+1.1
4,733,137	+		Pf6N2E2_4053	0.88	-0.5
4,733,137	+		Pf6N2E2_4053	0.88	-0.3
4,733,138	-		Pf6N2E2_4053	0.88	-0.7
4,733,314	+				-1.2
4,733,315	-				-0.9
4,733,315	-				+0.1
4,733,342	+				+0.1
4,733,342	+				-1.3
4,733,342	+				-0.5
4,733,342	+				-0.5
4,733,342	+				-0.8
4,733,342	+				-0.5
4,733,342	+				+1.1
4,733,342	+				-2.2
4,733,342	+				+1.1
4,733,343	-				+1.1
4,733,343	-				-1.2
4,733,343	-				-0.9
4,733,344	+				+0.1
4,733,358	+				+1.1
4,733,358	+				+0.1
4,733,358	+				-0.1
4,733,358	+				-0.6
4,733,358	+				+0.1
4,733,359	-				+1.1
4,733,359	-				-0.5
4,733,424	+				+1.1
4,733,424	+				+0.1
4,733,445	+				-1.2
4,733,446	-				-1.2
4,733,501	-				-0.5
4,733,501	-				+0.1
4,733,594	+		Pf6N2E2_4054	0.23	-0.5
4,733,595	-		Pf6N2E2_4054	0.23	-0.9
4,733,964	-				-0.9
4,733,984	-				-0.7
4,734,012	+				-1.2
4,734,012	+				-0.5
4,734,012	+				+1.1
4,734,013	-				+1.1
4,734,013	-				-0.6
4,734,013	-				-1.2
4,734,191	-		Pf6N2E2_4055	0.49	+1.1
4,734,191	-		Pf6N2E2_4055	0.49	+1.1
4,734,195	+		Pf6N2E2_4055	0.50	+2.1
4,734,195	+		Pf6N2E2_4055	0.50	+0.1
4,734,195	+		Pf6N2E2_4055	0.50	+1.1
4,734,195	+		Pf6N2E2_4055	0.50	-0.9
4,734,196	-		Pf6N2E2_4055	0.51	-0.6
4,734,203	+		Pf6N2E2_4055	0.54	+1.1
4,734,203	+		Pf6N2E2_4055	0.54	-1.6
4,734,204	-		Pf6N2E2_4055	0.54	+0.1
4,734,204	-		Pf6N2E2_4055	0.54	-0.2
4,734,204	-		Pf6N2E2_4055	0.54	+1.1
4,734,204	-		Pf6N2E2_4055	0.54	-0.5