Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3681

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
4,288,364	-		Pf6N2E2_3679	0.79	+1.0
4,288,402	+		Pf6N2E2_3679	0.83	+1.0
4,288,403	-		Pf6N2E2_3679	0.83	-1.8
4,288,498	-				+1.0
4,288,570	-				-1.1
4,288,645	+				+0.0
4,288,646	-				+1.0
4,288,646	-				+0.0
4,289,028	+		Pf6N2E2_3680	0.59	+0.0
4,289,028	+		Pf6N2E2_3680	0.59	+1.0
4,289,028	+		Pf6N2E2_3680	0.59	-1.8
4,289,029	-		Pf6N2E2_3680	0.59	+0.0
4,289,029	-		Pf6N2E2_3680	0.59	+1.0
4,289,160	+		Pf6N2E2_3680	0.78	+0.0
4,289,160	+		Pf6N2E2_3680	0.78	+1.0
4,289,160	+		Pf6N2E2_3680	0.78	+0.0
4,289,161	-		Pf6N2E2_3680	0.78	-1.6
4,289,161	-		Pf6N2E2_3680	0.78	-0.6
4,289,161	-		Pf6N2E2_3680	0.78	-1.8
4,289,161	-		Pf6N2E2_3680	0.78	-1.0
4,289,161	-		Pf6N2E2_3680	0.78	+0.0
4,289,161	-		Pf6N2E2_3680	0.78	+1.0
4,289,164	+		Pf6N2E2_3680	0.79	+0.0
4,289,164	+		Pf6N2E2_3680	0.79	+0.0
4,289,165	-		Pf6N2E2_3680	0.79	+1.0
4,289,165	-		Pf6N2E2_3680	0.79	+0.0
4,289,165	-		Pf6N2E2_3680	0.79	+0.0
4,289,289	+				-0.6
4,289,290	-				-0.9
4,289,290	-				-0.9
4,289,290	-				+0.0
4,289,580	-		Pf6N2E2_3681	0.11	-1.3
4,289,664	-		Pf6N2E2_3681	0.15	-1.5
4,289,664	-		Pf6N2E2_3681	0.15	-0.4
4,289,664	-		Pf6N2E2_3681	0.15	+0.0
4,289,728	+		Pf6N2E2_3681	0.18	-0.7
4,289,728	+		Pf6N2E2_3681	0.18	-0.1
4,289,922	+		Pf6N2E2_3681	0.28	+0.0
4,289,922	+		Pf6N2E2_3681	0.28	+1.0
4,289,922	+		Pf6N2E2_3681	0.28	-1.1
4,289,922	+		Pf6N2E2_3681	0.28	-1.0
4,289,922	+		Pf6N2E2_3681	0.28	+2.0
4,289,922	+		Pf6N2E2_3681	0.28	-0.3
4,289,922	+		Pf6N2E2_3681	0.28	+1.0
4,289,922	+		Pf6N2E2_3681	0.28	-1.8
4,289,923	-		Pf6N2E2_3681	0.28	-1.8
4,289,923	-		Pf6N2E2_3681	0.28	-0.2
4,289,968	-		Pf6N2E2_3681	0.30	+1.0
4,289,968	-		Pf6N2E2_3681	0.30	+0.0
4,290,380	-		Pf6N2E2_3681	0.50	-0.1
4,290,509	-		Pf6N2E2_3681	0.56	+0.0
4,290,509	-		Pf6N2E2_3681	0.56	+0.0
4,290,648	+		Pf6N2E2_3681	0.63	+0.0
4,290,648	+		Pf6N2E2_3681	0.63	+1.0
4,290,649	-		Pf6N2E2_3681	0.63	-1.2
4,290,649	-		Pf6N2E2_3681	0.63	+1.0
4,290,720	+		Pf6N2E2_3681	0.67	-1.6
4,290,816	+		Pf6N2E2_3681	0.71	-0.6
4,290,816	+		Pf6N2E2_3681	0.71	-0.6
4,290,816	+		Pf6N2E2_3681	0.71	+1.0
4,290,817	-		Pf6N2E2_3681	0.71	+1.0
4,290,817	-		Pf6N2E2_3681	0.71	+1.0
4,290,819	-		Pf6N2E2_3681	0.71	+0.0
4,290,972	+		Pf6N2E2_3681	0.79	-0.5
4,290,972	+		Pf6N2E2_3681	0.79	+1.0
4,290,973	-		Pf6N2E2_3681	0.79	+1.0
4,290,973	-		Pf6N2E2_3681	0.79	-1.2
4,290,988	-		Pf6N2E2_3681	0.80	-1.3
4,291,110	+		Pf6N2E2_3681	0.86	+0.0
4,291,110	+		Pf6N2E2_3681	0.86	-1.7
4,291,111	-		Pf6N2E2_3681	0.86	+0.0
4,291,111	-		Pf6N2E2_3681	0.86	+0.0
4,291,111	-		Pf6N2E2_3681	0.86	-1.1
4,291,180	+		Pf6N2E2_3681	0.89	-1.0
4,291,181	-		Pf6N2E2_3681	0.89	-0.2
4,291,181	-		Pf6N2E2_3681	0.89	+1.0
4,291,182	+		Pf6N2E2_3681	0.89	+0.0
4,291,182	+		Pf6N2E2_3681	0.89	-2.2
4,291,182	+		Pf6N2E2_3681	0.89	+1.0
4,291,182	+		Pf6N2E2_3681	0.89	-1.1
4,291,182	+		Pf6N2E2_3681	0.89	-2.0
4,291,183	-		Pf6N2E2_3681	0.89	+1.0
4,291,196	+		Pf6N2E2_3681	0.90	+1.0
4,291,300	-				+0.0
4,291,492	-				-0.6
4,291,495	+				-1.6
4,291,495	+				+0.0
4,291,495	+				+0.0
4,291,495	+				-0.3
4,291,495	+				+0.0
4,291,495	+				-0.6
4,291,495	+				+1.0
4,291,495	+				+1.0
4,291,495	+				+0.0
4,291,496	-				-0.6
4,291,496	-				-1.0
4,291,496	-				+0.0
4,291,496	-				+0.0
4,291,505	+				-0.0
4,291,595	+				+0.1
4,291,595	+				+0.0
4,291,595	+				-1.3
4,291,595	+				-1.1
4,291,596	-				+1.0
4,291,596	-				+1.0
4,291,596	-				+1.0
4,291,650	+				-0.6
4,291,758	+		Pf6N2E2_3682	0.17	+0.0
4,291,759	-		Pf6N2E2_3682	0.17	-0.6
4,291,796	+		Pf6N2E2_3682	0.25	-1.0
4,291,797	-		Pf6N2E2_3682	0.25	+1.0
4,292,109	+		Pf6N2E2_3682	0.88	-0.6
4,292,109	+		Pf6N2E2_3682	0.88	-0.5
4,292,109	+		Pf6N2E2_3682	0.88	+0.8
4,292,109	+		Pf6N2E2_3682	0.88	+1.0
4,292,110	-		Pf6N2E2_3682	0.88	-1.0
4,292,110	-		Pf6N2E2_3682	0.88	+1.0
4,292,206	+				+1.0
4,292,206	+				+0.0
4,292,206	+				+1.0
4,292,207	-				+1.0
4,292,207	-				+0.0
4,292,207	-				-1.5
4,292,207	-				-0.6
4,292,207	-				-1.0