Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3383

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
3,913,469	+		Pf6N2E2_3382	0.78	+1.0
3,913,469	+		Pf6N2E2_3382	0.78	+1.0
3,913,469	+		Pf6N2E2_3382	0.78	+1.0
3,913,469	+		Pf6N2E2_3382	0.78	-0.6
3,913,469	+		Pf6N2E2_3382	0.78	-0.9
3,913,470	-		Pf6N2E2_3382	0.78	+0.0
3,913,470	-		Pf6N2E2_3382	0.78	+0.0
3,913,470	-		Pf6N2E2_3382	0.78	-1.9
3,913,470	-		Pf6N2E2_3382	0.78	+1.0
3,913,470	-		Pf6N2E2_3382	0.78	+1.0
3,913,510	+		Pf6N2E2_3382	0.85	+1.0
3,913,510	+		Pf6N2E2_3382	0.85	-0.9
3,913,510	+		Pf6N2E2_3382	0.85	-1.4
3,913,510	+		Pf6N2E2_3382	0.85	-1.4
3,913,510	+		Pf6N2E2_3382	0.85	+0.2
3,913,510	+		Pf6N2E2_3382	0.85	-1.0
3,913,510	+		Pf6N2E2_3382	0.85	+0.0
3,913,511	-		Pf6N2E2_3382	0.85	+1.0
3,913,511	-		Pf6N2E2_3382	0.85	-0.6
3,913,511	-		Pf6N2E2_3382	0.85	+1.0
3,913,578	-				+2.0
3,913,578	-				+0.0
3,913,620	+				+1.0
3,913,620	+				-1.0
3,913,620	+				-0.6
3,913,621	-				+0.0
3,913,621	-				-0.6
3,913,621	-				+0.0
3,913,857	+		Pf6N2E2_3383	0.13	-1.4
3,913,857	+		Pf6N2E2_3383	0.13	-1.0
3,913,858	-		Pf6N2E2_3383	0.13	+0.0
3,913,858	-		Pf6N2E2_3383	0.13	+1.0
3,913,858	-		Pf6N2E2_3383	0.13	-0.2
3,914,006	+		Pf6N2E2_3383	0.34	+1.0
3,914,006	+		Pf6N2E2_3383	0.34	+0.0
3,914,007	-		Pf6N2E2_3383	0.34	-0.6
3,914,007	-		Pf6N2E2_3383	0.34	+0.4
3,914,025	+				+1.0
3,914,025	+		Pf6N2E2_3383	0.36	-0.6
3,914,026	-		Pf6N2E2_3383	0.36	+0.7
3,914,026	-		Pf6N2E2_3383	0.36	+1.0
3,914,062	-		Pf6N2E2_3383	0.41	+1.0
3,914,073	-		Pf6N2E2_3383	0.43	+0.0
3,914,271	+		Pf6N2E2_3383	0.70	+0.0
3,914,272	-		Pf6N2E2_3383	0.70	+1.0
3,914,572	-		Pf6N2E2_3384	0.13	-1.0
3,914,572	-		Pf6N2E2_3384	0.13	+0.0
3,914,585	+		Pf6N2E2_3384	0.15	+1.0
3,915,002	+		Pf6N2E2_3384	0.77	+1.0
3,915,002	+		Pf6N2E2_3384	0.77	+1.0
3,915,002	+		Pf6N2E2_3384	0.77	+1.0
3,915,003	-		Pf6N2E2_3384	0.77	-1.4
3,915,003	-		Pf6N2E2_3384	0.77	+0.0
3,915,003	-		Pf6N2E2_3384	0.77	-0.8
3,915,176	+				+0.0
3,915,176	+				+1.0
3,915,176	+				-1.0
3,915,176	+				+0.0
3,915,177	-				+0.0
3,915,288	-				+0.0
3,915,426	+				+1.0
3,915,426	+				+1.0