Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2952

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
3,441,093	+		Pf6N2E2_2950	0.18	-0.0
3,441,093	+		Pf6N2E2_2950	0.18	+1.0
3,441,093	+		Pf6N2E2_2950	0.18	-1.0
3,441,093	+		Pf6N2E2_2950	0.18	+1.6
3,441,094	-		Pf6N2E2_2950	0.18	+1.0
3,441,094	-		Pf6N2E2_2950	0.18	-0.5
3,441,094	-		Pf6N2E2_2950	0.18	+1.0
3,441,094	-		Pf6N2E2_2950	0.18	+1.0
3,441,094	-		Pf6N2E2_2950	0.18	+1.0
3,441,094	-		Pf6N2E2_2950	0.18	+1.0
3,441,109	-		Pf6N2E2_2950	0.22	+1.0
3,441,109	-		Pf6N2E2_2950	0.22	-0.9
3,441,207	-		Pf6N2E2_2950	0.43	-0.6
3,441,288	-		Pf6N2E2_2950	0.60	-0.6
3,441,405	+		Pf6N2E2_2950	0.85	+1.0
3,441,419	+		Pf6N2E2_2950	0.88	-1.6
3,441,419	+		Pf6N2E2_2950	0.88	-1.3
3,441,419	+		Pf6N2E2_2950	0.88	-0.6
3,441,420	-		Pf6N2E2_2950	0.88	-0.0
3,441,420	-		Pf6N2E2_2950	0.88	-0.0
3,441,420	-		Pf6N2E2_2950	0.88	+1.0
3,441,420	-		Pf6N2E2_2950	0.88	-1.3
3,441,420	-		Pf6N2E2_2950	0.88	+0.1
3,441,436	+				-0.0
3,441,436	+				-0.6
3,441,437	-				+1.0
3,441,437	-				+1.0
3,441,437	-				+1.0
3,441,448	-				+1.0
3,441,473	+				+1.0
3,441,714	+				-0.0
3,441,714	+				+1.0
3,441,714	+				+1.0
3,441,974	-				-2.5
3,441,974	-				-1.0
3,442,019	-				-1.0
3,442,019	-				-1.0
3,442,084	+		Pf6N2E2_2952	0.20	+1.0
3,442,085	-		Pf6N2E2_2952	0.20	-0.0
3,442,103	+		Pf6N2E2_2952	0.23	-0.6
3,442,103	+		Pf6N2E2_2952	0.23	-0.3
3,442,104	-		Pf6N2E2_2952	0.23	-2.3
3,442,104	-		Pf6N2E2_2952	0.23	-1.6
3,442,104	-		Pf6N2E2_2952	0.23	-1.1
3,442,410	+		Pf6N2E2_2952	0.78	+1.0
3,442,411	-		Pf6N2E2_2952	0.78	-0.0
3,442,411	-		Pf6N2E2_2952	0.78	+1.0
3,442,454	+		Pf6N2E2_2952	0.86	+1.0
3,442,454	+		Pf6N2E2_2952	0.86	+1.0
3,442,455	-		Pf6N2E2_2952	0.86	-0.0
3,442,524	+				+1.0
3,442,589	-		Pf6N2E2_2953	0.47	+1.0
3,442,651	+				+1.0
3,442,651	+				-0.0
3,442,651	+				-1.3
3,442,652	-				+1.0
3,442,652	-				+1.0
3,442,652	-				+0.6
3,442,652	-				-0.0
3,442,690	+				+1.0
3,442,691	-				-0.0
3,442,705	-				+1.0
3,442,705	-				+1.0
3,442,756	-				-0.8
3,442,973	-				-0.4
3,443,077	+		Pf6N2E2_2954	0.14	+1.0
3,443,077	+		Pf6N2E2_2954	0.14	-0.9
3,443,077	+		Pf6N2E2_2954	0.14	+1.0
3,443,077	+		Pf6N2E2_2954	0.14	-0.0
3,443,078	-		Pf6N2E2_2954	0.14	-1.0
3,443,119	+		Pf6N2E2_2954	0.16	-0.6
3,443,119	+		Pf6N2E2_2954	0.16	-2.0
3,443,119	+		Pf6N2E2_2954	0.16	-0.0
3,443,119	+		Pf6N2E2_2954	0.16	-0.0
3,443,120	-		Pf6N2E2_2954	0.16	+1.0
3,443,120	-		Pf6N2E2_2954	0.16	+1.0
3,443,120	-		Pf6N2E2_2954	0.16	-1.0
3,443,120	-		Pf6N2E2_2954	0.16	-0.8
3,443,120	-		Pf6N2E2_2954	0.16	+1.0
3,443,120	-		Pf6N2E2_2954	0.16	-0.0
3,443,120	-		Pf6N2E2_2954	0.16	-1.2
3,443,161	+		Pf6N2E2_2954	0.17	-0.9
3,443,162	-		Pf6N2E2_2954	0.17	-0.2
3,443,162	-		Pf6N2E2_2954	0.17	+1.0
3,443,183	-		Pf6N2E2_2954	0.18	-0.6
3,443,233	+		Pf6N2E2_2954	0.20	-0.5