Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2679

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
3,166,340	+				-1.2
3,166,341	-				+0.9
3,166,341	-				-0.7
3,166,341	-				-0.1
3,166,341	-				+0.9
3,166,341	-				+0.9
3,166,341	-				+0.9
3,166,724	+		Pf6N2E2_2678	0.39	+0.9
3,166,724	+		Pf6N2E2_2678	0.39	-1.1
3,166,724	+		Pf6N2E2_2678	0.39	+0.9
3,166,787	+		Pf6N2E2_2678	0.46	+0.9
3,166,787	+		Pf6N2E2_2678	0.46	+0.9
3,166,788	-		Pf6N2E2_2678	0.46	+0.1
3,166,788	-		Pf6N2E2_2678	0.46	-0.1
3,166,788	-		Pf6N2E2_2678	0.46	+0.9
3,166,788	-		Pf6N2E2_2678	0.46	-1.0
3,166,788	-		Pf6N2E2_2678	0.46	-0.7
3,166,788	-		Pf6N2E2_2678	0.46	-1.9
3,166,808	+		Pf6N2E2_2678	0.48	-0.1
3,166,808	+		Pf6N2E2_2678	0.48	-0.1
3,166,808	+		Pf6N2E2_2678	0.48	+0.9
3,166,808	+		Pf6N2E2_2678	0.48	+0.9
3,166,809	-		Pf6N2E2_2678	0.48	+0.9
3,166,809	-		Pf6N2E2_2678	0.48	-0.4
3,166,809	-		Pf6N2E2_2678	0.48	+0.9
3,166,809	-		Pf6N2E2_2678	0.48	-0.9
3,167,030	+		Pf6N2E2_2678	0.74	+0.9
3,167,030	+		Pf6N2E2_2678	0.74	+0.9
3,167,031	-		Pf6N2E2_2678	0.74	+0.9
3,167,031	-		Pf6N2E2_2678	0.74	+1.9
3,167,031	-		Pf6N2E2_2678	0.74	-0.9
3,167,043	-		Pf6N2E2_2678	0.75	+0.9
3,167,043	-		Pf6N2E2_2678	0.75	-0.1
3,167,043	-		Pf6N2E2_2678	0.75	+0.9
3,167,043	-		Pf6N2E2_2678	0.75	-0.4
3,167,043	-		Pf6N2E2_2678	0.75	-0.1
3,167,043	-		Pf6N2E2_2678	0.75	+0.9
3,167,043	-		Pf6N2E2_2678	0.75	-0.7
3,167,171	+				-0.7
3,167,171	+				-1.1
3,167,171	+				-1.7
3,167,171	+				-0.1
3,167,195	+				-0.9
3,167,245	+				-0.9
3,167,246	-				-1.1
3,167,246	-				-1.7
3,167,246	-				+0.9
3,167,249	+				-0.1
3,167,249	+				-0.9
3,167,330	+				+0.9
3,167,330	+				+0.9
3,167,331	-				+0.9
3,167,331	-				+0.9
3,167,338	+				-1.4
3,167,338	+				+0.9
3,167,339	-				-0.1
3,167,521	+				+0.9
3,167,522	-				-0.1
3,167,522	-				+0.9
3,167,522	-				+0.9
3,167,522	-				+0.9
3,167,528	+		Pf6N2E2_2679	0.10	+0.9
3,167,555	+		Pf6N2E2_2679	0.12	-0.1
3,167,672	+		Pf6N2E2_2679	0.18	-1.4
3,167,672	+		Pf6N2E2_2679	0.18	-1.4
3,167,672	+		Pf6N2E2_2679	0.18	+0.9
3,167,672	+		Pf6N2E2_2679	0.18	+0.9
3,167,673	-		Pf6N2E2_2679	0.18	+0.9
3,167,673	-		Pf6N2E2_2679	0.18	+0.3
3,167,673	-		Pf6N2E2_2679	0.18	-0.7
3,167,673	-		Pf6N2E2_2679	0.18	-0.1
3,167,673	-		Pf6N2E2_2679	0.18	-1.7
3,167,673	-		Pf6N2E2_2679	0.18	-0.1
3,167,673	-		Pf6N2E2_2679	0.18	-0.7
3,167,674	+		Pf6N2E2_2679	0.18	+0.9
3,167,675	-		Pf6N2E2_2679	0.18	+0.9
3,167,675	-		Pf6N2E2_2679	0.18	+0.9
3,167,675	-		Pf6N2E2_2679	0.18	-0.1
3,167,688	+		Pf6N2E2_2679	0.19	+0.9
3,167,688	+		Pf6N2E2_2679	0.19	+0.9
3,167,688	+		Pf6N2E2_2679	0.19	-0.1
3,167,688	+		Pf6N2E2_2679	0.19	-1.6
3,167,688	+		Pf6N2E2_2679	0.19	+0.9
3,167,688	+		Pf6N2E2_2679	0.19	-0.7
3,167,689	-		Pf6N2E2_2679	0.19	-0.8
3,167,689	-		Pf6N2E2_2679	0.19	-0.1
3,167,689	-		Pf6N2E2_2679	0.19	-0.7
3,167,808	+		Pf6N2E2_2679	0.25	-0.7
3,167,809	-		Pf6N2E2_2679	0.25	+0.9
3,167,809	-		Pf6N2E2_2679	0.25	-1.6
3,167,918	+		Pf6N2E2_2679	0.31	+0.9
3,167,919	-		Pf6N2E2_2679	0.31	-0.1
3,167,919	-		Pf6N2E2_2679	0.31	-0.1
3,167,925	-		Pf6N2E2_2679	0.31	-1.1
3,168,148	-		Pf6N2E2_2679	0.43	+0.9
3,168,167	+		Pf6N2E2_2679	0.44	-0.8
3,168,236	+		Pf6N2E2_2679	0.48	+0.9
3,168,257	+		Pf6N2E2_2679	0.49	-0.7
3,168,257	+		Pf6N2E2_2679	0.49	-1.7
3,168,258	-		Pf6N2E2_2679	0.49	-1.4
3,168,433	-		Pf6N2E2_2679	0.59	-1.1
3,168,457	+		Pf6N2E2_2679	0.60	-0.7
3,168,457	+		Pf6N2E2_2679	0.60	-0.4
3,168,458	-		Pf6N2E2_2679	0.60	-0.1
3,168,458	-		Pf6N2E2_2679	0.60	-0.1
3,168,594	+		Pf6N2E2_2679	0.67	+0.9
3,168,595	-		Pf6N2E2_2679	0.67	-0.1
3,168,616	-		Pf6N2E2_2679	0.68	+0.9
3,168,656	+		Pf6N2E2_2679	0.71	-0.1
3,168,656	+		Pf6N2E2_2679	0.71	+0.9
3,168,667	+		Pf6N2E2_2679	0.71	-0.7
3,168,671	-		Pf6N2E2_2679	0.71	-0.1
3,168,684	-		Pf6N2E2_2679	0.72	-0.1
3,168,684	-		Pf6N2E2_2679	0.72	-0.1
3,168,703	+		Pf6N2E2_2679	0.73	-1.2
3,168,703	+		Pf6N2E2_2679	0.73	-0.5
3,168,703	+		Pf6N2E2_2679	0.73	+0.9
3,168,704	-		Pf6N2E2_2679	0.73	+0.9
3,168,704	-		Pf6N2E2_2679	0.73	-1.4
3,168,901	+		Pf6N2E2_2679	0.84	-1.4
3,168,929	+		Pf6N2E2_2679	0.85	-0.1
3,168,932	-		Pf6N2E2_2679	0.85	+0.9
3,169,016	+		Pf6N2E2_2679	0.90	+0.9
3,169,088	+				-0.1
3,169,091	+				+0.5
3,169,091	+				-0.5
3,169,126	+				-1.9
3,169,126	+				+0.9
3,169,127	-				+0.9
3,169,127	-				-0.1
3,169,132	+				-2.1
3,169,132	+				+0.9
3,169,135	+				-1.6
3,169,135	+				+0.9
3,169,135	+				-0.1
3,169,135	+				-1.3
3,169,139	+				-0.1
3,169,139	+				-0.7
3,169,139	+				+0.9
3,169,139	+				-0.1
3,169,139	+				+0.9
3,169,140	-				+0.9
3,169,140	-				+0.9
3,169,162	+				-0.9
3,169,173	+				+0.9
3,169,173	+				+0.9
3,169,205	+				-0.4
3,169,205	+				+0.9
3,169,206	-				-2.9
3,169,236	+				-1.0
3,169,241	+				-1.4
3,169,296	+				+0.9
3,169,345	+				-0.1
3,169,345	+				-0.1
3,169,346	-				-1.1
3,169,352	-				-0.7
3,169,352	-				+0.9
3,169,473	-				-0.1
3,169,473	-				-0.7
3,169,639	+		Pf6N2E2_2680	0.22	+0.9
3,169,640	-		Pf6N2E2_2680	0.22	-0.1
3,169,640	-		Pf6N2E2_2680	0.22	-0.8
3,169,744	+		Pf6N2E2_2680	0.40	+0.9
3,169,745	-		Pf6N2E2_2680	0.40	-0.1
3,169,745	-		Pf6N2E2_2680	0.40	+0.9
3,169,745	-		Pf6N2E2_2680	0.40	-0.1
3,169,790	+		Pf6N2E2_2680	0.47	-0.7
3,169,790	+		Pf6N2E2_2680	0.47	-0.1
3,169,791	-		Pf6N2E2_2680	0.47	-1.7
3,169,791	-		Pf6N2E2_2680	0.47	+0.9
3,169,816	+		Pf6N2E2_2680	0.52	-0.7
3,169,816	+		Pf6N2E2_2680	0.52	+0.9
3,170,031	-		Pf6N2E2_2680	0.88	-1.4
3,170,112	+				-0.1
3,170,112	+				-1.7
3,170,112	+				+0.9
3,170,112	+				+0.9
3,170,112	+				+0.9
3,170,112	+				-0.1
3,170,113	-				-1.1