Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1432

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,681,371	+		Pf6N2E2_1431	0.63	+0.8
1,681,372	-		Pf6N2E2_1431	0.63	-0.8
1,681,492	-		Pf6N2E2_1431	0.74	-0.2
1,681,779	-				-0.2
1,681,895	+		Pf6N2E2_1432	0.13	+0.8
1,681,896	-		Pf6N2E2_1432	0.13	+0.8
1,681,963	-		Pf6N2E2_1432	0.21	-0.2
1,682,351	+		Pf6N2E2_1432	0.65	-0.2
1,682,351	+		Pf6N2E2_1432	0.65	-2.0
1,682,352	-		Pf6N2E2_1432	0.65	-1.0
1,682,573	+				-1.7
1,682,606	+				+0.8
1,682,607	-				-0.8
1,682,607	-				-0.8
1,682,607	-				-2.2
1,682,607	-				+0.8
1,682,607	-				+2.8
1,682,607	-				-0.5
1,682,638	+				+0.8
1,682,638	+				-0.2
1,682,911	+		Pf6N2E2_1433	0.24	-0.5
1,683,031	-		Pf6N2E2_1433	0.39	-2.0
1,683,233	-		Pf6N2E2_1433	0.65	-0.9
1,683,334	-		Pf6N2E2_1433	0.78	+0.8
1,683,466	+				+0.8
1,683,466	+				+0.8
1,683,467	-				+0.8