Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1102

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,287,434	-				-1.0
1,287,531	-				-0.2
1,287,603	+		Pf6N2E2_1101	0.14	-0.2
1,287,604	-		Pf6N2E2_1101	0.14	+0.8
1,287,604	-		Pf6N2E2_1101	0.14	+0.8
1,287,604	-		Pf6N2E2_1101	0.14	-2.3
1,287,604	-		Pf6N2E2_1101	0.14	+0.8
1,287,604	-		Pf6N2E2_1101	0.14	-0.2
1,287,604	-		Pf6N2E2_1101	0.14	+0.8
1,287,752	+		Pf6N2E2_1101	0.38	-0.8
1,288,009	+		Pf6N2E2_1101	0.81	-0.2
1,288,010	-		Pf6N2E2_1101	0.81	-0.6
1,288,010	-		Pf6N2E2_1101	0.81	+0.0
1,288,010	-		Pf6N2E2_1101	0.81	-0.2
1,288,300	+				-0.2
1,288,322	+				-0.8
1,288,336	-				+0.8
1,288,344	-				+0.8
1,288,349	+				+0.8
1,288,349	+				+0.8
1,288,349	+				-0.8
1,288,349	+				+0.8
1,288,350	-				+0.8
1,288,350	-				-0.2
1,288,393	+				+0.8
1,288,442	+				-0.2
1,288,442	+				+0.8
1,288,442	+				+0.8
1,288,443	-				+0.8
1,288,443	-				-0.2
1,288,443	-				-1.8
1,288,524	-		Pf6N2E2_1102	0.15	+0.8
1,288,629	+		Pf6N2E2_1102	0.22	+0.8
1,288,877	+		Pf6N2E2_1102	0.40	-0.2
1,288,877	+		Pf6N2E2_1102	0.40	-0.5
1,288,877	+		Pf6N2E2_1102	0.40	-1.2
1,289,408	+		Pf6N2E2_1102	0.77	-0.7
1,289,408	+		Pf6N2E2_1102	0.77	+0.8
1,289,408	+		Pf6N2E2_1102	0.77	-1.0
1,289,409	-		Pf6N2E2_1102	0.77	+0.8
1,289,409	-		Pf6N2E2_1102	0.77	-0.8
1,289,417	+		Pf6N2E2_1102	0.77	-0.2
1,289,417	+		Pf6N2E2_1102	0.77	-0.2
1,289,417	+		Pf6N2E2_1102	0.77	+0.8
1,289,417	+		Pf6N2E2_1102	0.77	+0.8
1,289,417	+		Pf6N2E2_1102	0.77	+0.8
1,289,418	-		Pf6N2E2_1102	0.77	+0.8
1,289,418	-		Pf6N2E2_1102	0.77	-0.2
1,289,669	+				+0.8
1,289,669	+				-0.9
1,289,669	+				-1.8
1,289,669	+				+0.8
1,289,669	+				-0.5
1,289,670	-				-1.0
1,289,758	+				+0.8
1,289,759	-				-0.2
1,289,973	+		Pf6N2E2_1103	0.27	-0.5
1,289,974	-		Pf6N2E2_1103	0.27	-0.2
1,289,974	-		Pf6N2E2_1103	0.27	-1.5
1,290,145	+		Pf6N2E2_1103	0.49	-0.6
1,290,146	-		Pf6N2E2_1103	0.49	+0.8
1,290,146	-		Pf6N2E2_1103	0.49	+0.4
1,290,146	-		Pf6N2E2_1103	0.49	+1.8
1,290,359	-		Pf6N2E2_1103	0.76	+0.8