Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5460

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
6,269,254	-		Pf6N2E2_5459	0.47	+1.0
6,269,359	-		Pf6N2E2_5459	0.54	+0.0
6,269,392	-		Pf6N2E2_5459	0.57	+0.4
6,269,547	+		Pf6N2E2_5459	0.68	-1.0
6,269,548	-		Pf6N2E2_5459	0.68	+0.0
6,269,667	+		Pf6N2E2_5459	0.76	+0.0
6,269,667	+		Pf6N2E2_5459	0.76	-1.1
6,269,668	-		Pf6N2E2_5459	0.76	+1.0
6,269,668	-		Pf6N2E2_5459	0.76	+0.0
6,269,805	+		Pf6N2E2_5459	0.86	-0.6
6,269,806	-		Pf6N2E2_5459	0.86	-0.3
6,269,806	-		Pf6N2E2_5459	0.86	+1.0
6,269,821	-		Pf6N2E2_5459	0.87	-1.0
6,269,835	+		Pf6N2E2_5459	0.88	+1.0
6,269,836	-		Pf6N2E2_5459	0.88	+1.0
6,269,836	-		Pf6N2E2_5459	0.88	+1.0
6,269,836	-		Pf6N2E2_5459	0.88	-0.7
6,269,880	+				-0.4
6,269,881	-				+0.0
6,269,881	-				-0.9
6,269,881	-				-0.6
6,269,907	+				-0.6
6,269,907	+				-0.9
6,269,907	+				-1.8
6,269,907	+				+1.0
6,269,907	+				+0.0
6,269,907	+				+1.0
6,269,907	+				+1.0
6,269,907	+				-0.8
6,269,908	-				+1.0
6,269,908	-				+1.0
6,269,908	-				-0.6
6,269,908	-				+1.0
6,269,908	-				+1.0
6,269,949	+				-0.5
6,269,950	-				-1.3
6,269,950	-				-1.0
6,269,953	+				-1.8
6,269,953	+				-0.7
6,269,954	-				+1.0
6,270,012	-				+1.0
6,270,023	-				-0.9
6,270,115	+				+1.0
6,270,116	-				+1.0
6,270,116	-				-1.2
6,270,116	-				+1.0
6,270,190	-				+0.6
6,270,222	-				-0.6
6,270,289	-				+1.0
6,270,293	-				+0.6
6,270,326	-				-0.6
6,270,695	-		Pf6N2E2_5460	0.31	-0.0
6,270,732	-		Pf6N2E2_5460	0.34	-1.2
6,270,938	+		Pf6N2E2_5460	0.47	-0.0
6,271,009	+		Pf6N2E2_5460	0.52	+1.0
6,271,157	-		Pf6N2E2_5460	0.62	-0.0
6,271,439	+		Pf6N2E2_5460	0.80	+1.0
6,271,479	+		Pf6N2E2_5460	0.83	-1.0
6,271,517	+		Pf6N2E2_5460	0.86	+1.0
6,271,535	+		Pf6N2E2_5460	0.87	-0.0
6,271,548	+		Pf6N2E2_5460	0.88	+1.0
6,271,556	+		Pf6N2E2_5460	0.88	+1.0
6,271,556	+		Pf6N2E2_5460	0.88	-0.0
6,271,559	+		Pf6N2E2_5460	0.88	+1.0
6,271,618	-				+1.0
6,271,619	+				+1.0
6,271,630	+				+1.0
6,271,710	+				-0.0
6,271,766	+				-0.6
6,271,766	+				+1.0
6,271,798	+				-1.5
6,271,990	+		Pf6N2E2_5461	0.16	+1.0
6,271,990	+		Pf6N2E2_5461	0.16	-0.0
6,271,990	+		Pf6N2E2_5461	0.16	-1.3