Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4900

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
5,651,814	+				+1.1
5,651,814	+				+1.1
5,651,815	-				-0.5
5,651,892	+				+1.1
5,651,892	+				-0.9
5,651,892	+				+1.1
5,651,892	+				-0.2
5,651,893	-				-0.7
5,651,893	-				+1.1
5,651,893	-				-0.5
5,651,893	-				-1.3
5,651,896	+				-1.0
5,651,897	-				+1.1
5,651,910	+				+1.1
5,651,910	+				+1.6
5,651,911	-				+0.1
5,651,911	-				+0.1
5,651,911	-				+0.1
5,651,911	-				+0.1
5,651,919	+				-0.5
5,651,920	-				-1.9
5,652,178	+		Pf6N2E2_4899	0.35	+0.1
5,652,179	-		Pf6N2E2_4899	0.35	-1.5
5,652,211	-		Pf6N2E2_4899	0.40	+1.1
5,652,241	+		Pf6N2E2_4899	0.43	+1.1
5,652,241	+		Pf6N2E2_4899	0.43	-2.1
5,652,241	+		Pf6N2E2_4899	0.43	-0.4
5,652,241	+		Pf6N2E2_4899	0.43	+1.1
5,652,241	+		Pf6N2E2_4899	0.43	+1.1
5,652,242	-		Pf6N2E2_4899	0.44	-0.9
5,652,242	-		Pf6N2E2_4899	0.44	+0.1
5,652,242	-		Pf6N2E2_4899	0.44	+0.1
5,652,242	-		Pf6N2E2_4899	0.44	-0.1
5,652,242	-		Pf6N2E2_4899	0.44	+0.5
5,652,242	-		Pf6N2E2_4899	0.44	+0.1
5,652,250	+		Pf6N2E2_4899	0.45	+0.1
5,652,316	+		Pf6N2E2_4899	0.53	-0.9
5,652,316	+		Pf6N2E2_4899	0.53	-0.5
5,652,317	-		Pf6N2E2_4899	0.53	-1.3
5,652,317	-		Pf6N2E2_4899	0.53	-0.5
5,652,317	-		Pf6N2E2_4899	0.53	+1.1
5,652,377	-		Pf6N2E2_4899	0.61	+2.1
5,652,475	+		Pf6N2E2_4899	0.74	-0.9
5,652,475	+		Pf6N2E2_4899	0.74	+1.1
5,652,475	+		Pf6N2E2_4899	0.74	-0.3
5,652,475	+		Pf6N2E2_4899	0.74	-2.7
5,652,475	+		Pf6N2E2_4899	0.74	+1.1
5,652,475	+		Pf6N2E2_4899	0.74	-1.3
5,652,475	+		Pf6N2E2_4899	0.74	-0.5
5,652,475	+		Pf6N2E2_4899	0.74	+1.1
5,652,476	-		Pf6N2E2_4899	0.74	-0.6
5,652,476	-		Pf6N2E2_4899	0.74	-0.9
5,652,476	-		Pf6N2E2_4899	0.74	+0.1
5,652,476	-		Pf6N2E2_4899	0.74	+0.1
5,652,476	-		Pf6N2E2_4899	0.74	-1.7
5,652,476	-		Pf6N2E2_4899	0.74	-0.5
5,652,476	-		Pf6N2E2_4899	0.74	+1.1
5,652,476	-		Pf6N2E2_4899	0.74	+1.1
5,652,476	-		Pf6N2E2_4899	0.74	-0.7
5,652,476	-		Pf6N2E2_4899	0.74	-0.5
5,652,476	-		Pf6N2E2_4899	0.74	+1.1
5,652,476	-		Pf6N2E2_4899	0.74	+1.1
5,652,596	-				-0.4
5,652,596	-				-0.5
5,652,723	+				+0.1
5,652,724	-				+1.1
5,652,735	+				-0.9
5,652,736	-				-0.5
5,652,736	-				+0.1
5,652,736	-				-0.7
5,652,736	-				+1.1
5,652,736	-				+0.1
5,652,736	-				-0.3
5,652,854	+				+0.1
5,652,854	+				-0.5
5,652,855	-				-1.1
5,652,855	-				+0.1
5,652,855	-				+1.1
5,652,890	+				-2.0
5,652,890	+				+0.1
5,652,891	-				+1.1
5,652,891	-				-0.5
5,652,891	-				-0.6
5,653,053	-		Pf6N2E2_4900	0.25	-0.5
5,653,337	+		Pf6N2E2_4900	0.54	-0.5
5,653,337	+		Pf6N2E2_4900	0.54	-1.3
5,653,338	-		Pf6N2E2_4900	0.54	+0.1
5,653,338	-		Pf6N2E2_4900	0.54	+0.1
5,653,413	-		Pf6N2E2_4900	0.61	+0.1
5,653,413	-		Pf6N2E2_4900	0.61	+0.1
5,653,441	+		Pf6N2E2_4900	0.64	+1.1
5,653,473	-		Pf6N2E2_4900	0.67	+0.1
5,653,526	+		Pf6N2E2_4900	0.73	+0.1
5,653,526	+		Pf6N2E2_4900	0.73	+0.1
5,653,526	+		Pf6N2E2_4900	0.73	+0.1
5,653,526	+		Pf6N2E2_4900	0.73	-1.3
5,653,526	+		Pf6N2E2_4900	0.73	-0.9
5,653,526	+		Pf6N2E2_4900	0.73	+0.1
5,653,526	+		Pf6N2E2_4900	0.73	+0.1
5,653,527	-		Pf6N2E2_4900	0.73	+1.1
5,653,527	-		Pf6N2E2_4900	0.73	+1.1
5,653,527	-		Pf6N2E2_4900	0.73	+0.5
5,653,527	-		Pf6N2E2_4900	0.73	+1.1
5,653,527	-		Pf6N2E2_4900	0.73	+1.1
5,653,527	-		Pf6N2E2_4900	0.73	-0.5
5,653,527	-		Pf6N2E2_4900	0.73	-0.7
5,653,527	-		Pf6N2E2_4900	0.73	-1.0
5,653,556	+		Pf6N2E2_4900	0.76	+1.1
5,653,556	+		Pf6N2E2_4900	0.76	+0.1
5,653,556	+		Pf6N2E2_4900	0.76	+0.1
5,653,556	+		Pf6N2E2_4900	0.76	+0.1
5,653,556	+		Pf6N2E2_4900	0.76	-1.4
5,653,556	+		Pf6N2E2_4900	0.76	-0.7
5,653,557	-		Pf6N2E2_4900	0.76	-1.3
5,653,557	-		Pf6N2E2_4900	0.76	+1.1
5,653,557	-		Pf6N2E2_4900	0.76	-1.0
5,653,557	-		Pf6N2E2_4900	0.76	+0.1
5,653,557	-		Pf6N2E2_4900	0.76	+1.1
5,653,557	-		Pf6N2E2_4900	0.76	+0.1
5,653,557	-		Pf6N2E2_4900	0.76	+0.1
5,653,557	-		Pf6N2E2_4900	0.76	-2.3
5,653,557	-		Pf6N2E2_4900	0.76	-0.9
5,653,557	-		Pf6N2E2_4900	0.76	-1.3
5,653,557	-		Pf6N2E2_4900	0.76	+1.1
5,653,853	-				+0.1
5,653,853	-				-1.2
5,653,990	-		Pf6N2E2_4901	0.16	+1.1
5,654,151	+		Pf6N2E2_4901	0.28	+1.1
5,654,152	-		Pf6N2E2_4901	0.28	+1.1
5,654,158	-				+1.1
5,654,158	-		Pf6N2E2_4901	0.29	-0.4
5,654,158	-		Pf6N2E2_4901	0.29	-0.5
5,654,158	-		Pf6N2E2_4901	0.29	-0.5
5,654,184	+		Pf6N2E2_4901	0.31	+1.1
5,654,184	+		Pf6N2E2_4901	0.31	+1.1
5,654,184	+		Pf6N2E2_4901	0.31	+0.1
5,654,185	-		Pf6N2E2_4901	0.31	-0.6
5,654,185	-		Pf6N2E2_4901	0.31	-0.9
5,654,185	-		Pf6N2E2_4901	0.31	-1.3
5,654,185	-		Pf6N2E2_4901	0.31	+1.1
5,654,185	-		Pf6N2E2_4901	0.31	-0.5
5,654,185	-		Pf6N2E2_4901	0.31	+1.1
5,654,190	+		Pf6N2E2_4901	0.31	+1.1
5,654,190	+		Pf6N2E2_4901	0.31	+0.9
5,654,190	+		Pf6N2E2_4901	0.31	-0.8
5,654,191	-		Pf6N2E2_4901	0.31	+0.1
5,654,191	-		Pf6N2E2_4901	0.31	+1.1
5,654,191	-		Pf6N2E2_4901	0.31	+1.1
5,654,252	+		Pf6N2E2_4901	0.36	-0.9
5,654,252	+		Pf6N2E2_4901	0.36	+1.1
5,654,252	+		Pf6N2E2_4901	0.36	+1.1
5,654,253	-		Pf6N2E2_4901	0.36	+1.1
5,654,316	+		Pf6N2E2_4901	0.41	-0.7
5,654,317	-		Pf6N2E2_4901	0.41	-0.2
5,654,317	-		Pf6N2E2_4901	0.41	+0.1
5,654,317	-		Pf6N2E2_4901	0.41	-0.4
5,654,317	-		Pf6N2E2_4901	0.41	+1.1
5,654,367	+		Pf6N2E2_4901	0.45	+0.1
5,654,368	-		Pf6N2E2_4901	0.45	+0.1
5,654,368	-		Pf6N2E2_4901	0.45	+1.1
5,654,368	-		Pf6N2E2_4901	0.45	+0.1
5,654,484	+		Pf6N2E2_4901	0.54	+0.1
5,654,484	+		Pf6N2E2_4901	0.54	-1.3
5,654,485	-		Pf6N2E2_4901	0.54	-0.9
5,654,485	-		Pf6N2E2_4901	0.54	+1.1
5,654,485	-		Pf6N2E2_4901	0.54	-0.9
5,654,485	-		Pf6N2E2_4901	0.54	+0.1
5,654,517	-		Pf6N2E2_4901	0.56	+0.1
5,654,568	+		Pf6N2E2_4901	0.60	+0.1
5,654,568	+		Pf6N2E2_4901	0.60	-2.1