Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4824

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
5,578,217	+		Pf6N2E2_4823	0.67	-0.9
5,578,276	-		Pf6N2E2_4823	0.70	+1.1
5,578,300	+		Pf6N2E2_4823	0.71	+0.1
5,578,300	+		Pf6N2E2_4823	0.71	+1.1
5,578,309	+		Pf6N2E2_4823	0.72	+0.1
5,578,309	+		Pf6N2E2_4823	0.72	+1.1
5,578,309	+		Pf6N2E2_4823	0.72	+0.1
5,578,310	-		Pf6N2E2_4823	0.72	+0.1
5,578,310	-		Pf6N2E2_4823	0.72	+0.1
5,578,310	-		Pf6N2E2_4823	0.72	+1.1
5,578,310	-		Pf6N2E2_4823	0.72	+1.1
5,578,337	+		Pf6N2E2_4823	0.73	-0.6
5,578,337	+		Pf6N2E2_4823	0.73	+0.5
5,578,337	+		Pf6N2E2_4823	0.73	-0.5
5,578,337	+		Pf6N2E2_4823	0.73	+0.1
5,578,338	-		Pf6N2E2_4823	0.73	+0.5
5,578,338	-		Pf6N2E2_4823	0.73	-0.9
5,578,338	-		Pf6N2E2_4823	0.73	+1.1
5,578,338	-		Pf6N2E2_4823	0.73	-0.6
5,578,338	-		Pf6N2E2_4823	0.73	+1.1
5,578,340	+		Pf6N2E2_4823	0.73	+1.1
5,578,340	+		Pf6N2E2_4823	0.73	+1.1
5,578,340	+		Pf6N2E2_4823	0.73	-1.2
5,578,340	+		Pf6N2E2_4823	0.73	+0.1
5,578,340	+		Pf6N2E2_4823	0.73	-0.8
5,578,341	-		Pf6N2E2_4823	0.73	+0.1
5,578,580	+		Pf6N2E2_4823	0.85	+1.1
5,578,581	-		Pf6N2E2_4823	0.86	-0.3
5,578,581	-		Pf6N2E2_4823	0.86	+1.1
5,578,604	+		Pf6N2E2_4823	0.87	+0.1
5,578,604	+		Pf6N2E2_4823	0.87	+0.1
5,578,604	+		Pf6N2E2_4823	0.87	-0.4
5,578,605	-		Pf6N2E2_4823	0.87	-1.0
5,578,605	-		Pf6N2E2_4823	0.87	-0.3
5,578,605	-		Pf6N2E2_4823	0.87	+0.1
5,578,605	-		Pf6N2E2_4823	0.87	-1.7
5,578,605	-		Pf6N2E2_4823	0.87	+1.1
5,578,605	-		Pf6N2E2_4823	0.87	+0.2
5,578,605	-		Pf6N2E2_4823	0.87	+1.1
5,578,605	-		Pf6N2E2_4823	0.87	+1.1
5,578,605	-		Pf6N2E2_4823	0.87	-0.5
5,578,605	-		Pf6N2E2_4823	0.87	-0.6
5,578,628	+		Pf6N2E2_4823	0.88	-0.2
5,578,628	+		Pf6N2E2_4823	0.88	+2.1
5,578,716	-				+1.1
5,578,816	+				+0.1
5,578,817	-				+0.4
5,578,822	-				-1.5
5,578,849	-				+0.6
5,578,921	+				+0.1
5,578,922	-				+0.1
5,578,941	+				-0.6
5,578,941	+				+1.1
5,578,941	+				+0.1
5,578,942	-				+0.1
5,578,942	-				+0.1
5,578,942	-				+1.1
5,578,942	-				-0.5
5,578,942	-				+1.1
5,578,942	-				-2.4
5,578,942	-				+1.1
5,578,946	+				-0.4
5,578,946	+				-0.2
5,578,946	+				-0.5
5,578,947	-				+0.1
5,578,947	-				+0.1
5,578,947	-				-0.5
5,578,947	-				-1.3
5,578,961	+				-0.7
5,578,962	-				-2.5
5,578,962	-				+1.1
5,578,962	-				-2.5
5,579,104	+				+1.1
5,579,104	+				-0.9
5,579,105	-				+1.1
5,579,179	+				+0.1
5,579,179	+				+1.1
5,579,179	+				+1.1
5,579,179	+				-1.5
5,579,180	-				-3.0
5,579,197	+				+0.1
5,579,197	+				+1.1
5,579,197	+				+0.1
5,579,198	-				-1.5
5,579,198	-				+1.1
5,579,198	-				-0.5
5,579,233	+				+0.1
5,579,233	+				-0.5
5,579,233	+				+1.1
5,579,233	+				+0.1
5,579,233	+				+1.1
5,579,233	+				+0.1
5,579,234	-				-1.3
5,579,234	-				-0.5
5,579,234	-				+1.1
5,579,234	-				+1.1
5,579,234	-				-1.5
5,579,234	-				+1.1
5,579,234	-				-2.3
5,579,244	+				+2.1
5,579,245	-				-0.5
5,579,248	+				+0.5
5,579,248	+				+0.1
5,579,249	-				+0.1
5,579,249	-				+1.1
5,579,263	+				+1.1
5,579,413	+		Pf6N2E2_4824	0.34	+1.1
5,579,413	+		Pf6N2E2_4824	0.34	+1.1
5,579,413	+		Pf6N2E2_4824	0.34	+0.1
5,579,493	-		Pf6N2E2_4824	0.47	-1.0
5,579,518	-		Pf6N2E2_4824	0.52	-3.9
5,579,523	+		Pf6N2E2_4824	0.52	+1.1
5,579,523	+		Pf6N2E2_4824	0.52	+1.1
5,579,523	+		Pf6N2E2_4824	0.52	-0.7
5,579,524	-		Pf6N2E2_4824	0.53	+1.1
5,579,524	-		Pf6N2E2_4824	0.53	+1.1
5,579,578	-		Pf6N2E2_4824	0.62	-2.9
5,579,710	-		Pf6N2E2_4824	0.84	+1.1
5,579,739	+		Pf6N2E2_4824	0.89	+1.1
5,579,739	+		Pf6N2E2_4824	0.89	+0.1
5,579,739	+		Pf6N2E2_4824	0.89	+1.1
5,579,739	+		Pf6N2E2_4824	0.89	+0.1
5,579,739	+		Pf6N2E2_4824	0.89	-0.9
5,579,740	-		Pf6N2E2_4824	0.89	+1.1
5,579,740	-		Pf6N2E2_4824	0.89	-3.3
5,579,820	+				-4.2
5,580,081	+		Pf6N2E2_4825	0.25	+1.1
5,580,081	+		Pf6N2E2_4825	0.25	+0.1
5,580,208	+		Pf6N2E2_4825	0.37	+1.1
5,580,208	+		Pf6N2E2_4825	0.37	+1.1
5,580,208	+		Pf6N2E2_4825	0.37	+0.1
5,580,208	+		Pf6N2E2_4825	0.37	-4.5
5,580,209	-		Pf6N2E2_4825	0.38	+0.1
5,580,209	-		Pf6N2E2_4825	0.38	-2.1
5,580,243	+		Pf6N2E2_4825	0.41	+1.1
5,580,288	+		Pf6N2E2_4825	0.45	+1.1
5,580,363	+		Pf6N2E2_4825	0.52	-2.4
5,580,363	+		Pf6N2E2_4825	0.52	+1.1
5,580,363	+		Pf6N2E2_4825	0.52	-0.5
5,580,392	+		Pf6N2E2_4825	0.55	+1.1
5,580,393	-		Pf6N2E2_4825	0.55	+1.1
5,580,516	+		Pf6N2E2_4825	0.67	-0.5
5,580,517	-		Pf6N2E2_4825	0.67	+1.1
5,580,517	-		Pf6N2E2_4825	0.67	+0.1
5,580,517	-		Pf6N2E2_4825	0.67	+1.1
5,580,517	-		Pf6N2E2_4825	0.67	-0.9
5,580,556	+		Pf6N2E2_4825	0.71	-0.9
5,580,582	+		Pf6N2E2_4825	0.73	-2.5
5,580,728	-		Pf6N2E2_4825	0.87	-2.3
5,580,728	-		Pf6N2E2_4825	0.87	+0.1