Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4709

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
5,440,963	+				+0.1
5,440,963	+				+1.1
5,440,963	+				-1.3
5,440,964	-				+1.1
5,440,964	-				+1.1
5,440,964	-				+1.1
5,440,964	-				-0.7
5,440,968	-				+1.1
5,441,126	+				+1.1
5,441,226	-				-0.4
5,441,226	-				-0.6
5,441,279	-				+0.1
5,441,392	-				-0.7
5,441,392	-				+1.1
5,441,428	-				+1.1
5,441,491	+				-0.0
5,441,491	+				+1.1
5,441,492	-				+1.1
5,441,498	-				-0.6
5,441,498	-				-0.5
5,441,498	-				+1.1
5,441,498	-				-0.9
5,441,498	-				+1.1
5,441,498	-				+3.1
5,441,599	-				+0.1
5,441,606	+				-0.5
5,441,607	-				+1.1
5,441,607	-				-0.5
5,441,614	-				-0.6
5,441,673	-				+0.1
5,441,673	-				-0.3
5,441,673	-				-0.9
5,441,726	+				+1.1
5,441,727	-				+1.1
5,441,727	-				-0.5
5,441,819	+				-0.4
5,441,819	+				+0.1
5,441,820	-		Pf6N2E2_4708	0.10	+0.1
5,441,820	-		Pf6N2E2_4708	0.10	+1.1
5,441,851	-		Pf6N2E2_4708	0.25	+1.1
5,442,003	+				+1.1
5,442,004	-				+1.1
5,442,487	-		Pf6N2E2_4709	0.15	+0.1
5,442,593	+		Pf6N2E2_4709	0.18	-0.6
5,442,594	-		Pf6N2E2_4709	0.18	+1.1
5,442,627	+		Pf6N2E2_4709	0.19	+1.1
5,442,627	+		Pf6N2E2_4709	0.19	+0.1
5,442,628	-		Pf6N2E2_4709	0.19	+1.1
5,442,628	-		Pf6N2E2_4709	0.19	+1.1
5,442,628	-		Pf6N2E2_4709	0.19	-0.6
5,442,628	-		Pf6N2E2_4709	0.19	-0.5
5,442,628	-		Pf6N2E2_4709	0.19	+1.1
5,442,628	-		Pf6N2E2_4709	0.19	+1.1
5,442,628	-		Pf6N2E2_4709	0.19	-0.1
5,442,727	-		Pf6N2E2_4709	0.22	+0.4
5,443,117	+		Pf6N2E2_4709	0.33	+0.1
5,443,118	-		Pf6N2E2_4709	0.34	+1.1
5,443,118	-		Pf6N2E2_4709	0.34	+0.2
5,443,158	+		Pf6N2E2_4709	0.35	+1.1
5,443,158	+		Pf6N2E2_4709	0.35	+1.1
5,443,158	+		Pf6N2E2_4709	0.35	+1.1
5,443,159	-		Pf6N2E2_4709	0.35	+1.1
5,443,159	-		Pf6N2E2_4709	0.35	+1.1
5,443,198	-		Pf6N2E2_4709	0.36	-0.4
5,443,198	-		Pf6N2E2_4709	0.36	-0.9
5,443,214	+		Pf6N2E2_4709	0.36	+0.1
5,443,215	-		Pf6N2E2_4709	0.36	+1.1
5,443,215	-		Pf6N2E2_4709	0.36	+1.1
5,443,227	+		Pf6N2E2_4709	0.37	-0.6
5,443,228	-		Pf6N2E2_4709	0.37	+1.1
5,443,228	-		Pf6N2E2_4709	0.37	-0.5
5,443,542	+		Pf6N2E2_4709	0.46	+0.1
5,443,542	+		Pf6N2E2_4709	0.46	+1.1
5,443,542	+		Pf6N2E2_4709	0.46	+1.1
5,443,542	+		Pf6N2E2_4709	0.46	-1.5
5,443,543	-		Pf6N2E2_4709	0.46	-0.8
5,443,662	+		Pf6N2E2_4709	0.49	+1.1
5,443,788	+		Pf6N2E2_4709	0.53	-2.4
5,444,017	-		Pf6N2E2_4709	0.60	-0.5
5,444,017	-		Pf6N2E2_4709	0.60	-0.6
5,444,017	-		Pf6N2E2_4709	0.60	+1.1
5,444,017	-		Pf6N2E2_4709	0.60	-1.2
5,444,017	-		Pf6N2E2_4709	0.60	+1.1
5,444,052	+		Pf6N2E2_4709	0.61	+1.1
5,444,055	+		Pf6N2E2_4709	0.61	+0.1
5,444,055	+		Pf6N2E2_4709	0.61	-0.9
5,444,055	+		Pf6N2E2_4709	0.61	-0.9
5,444,055	+		Pf6N2E2_4709	0.61	+0.9
5,444,056	-		Pf6N2E2_4709	0.61	+1.1
5,444,056	-		Pf6N2E2_4709	0.61	+1.1
5,444,056	-		Pf6N2E2_4709	0.61	+0.8
5,444,056	-		Pf6N2E2_4709	0.61	+1.1
5,444,056	-		Pf6N2E2_4709	0.61	+0.3
5,444,127	+		Pf6N2E2_4709	0.63	+1.1
5,444,127	+		Pf6N2E2_4709	0.63	+1.1
5,444,127	+		Pf6N2E2_4709	0.63	-0.7
5,444,128	-		Pf6N2E2_4709	0.63	-0.7
5,444,128	-		Pf6N2E2_4709	0.63	-0.6
5,444,128	-		Pf6N2E2_4709	0.63	-0.5
5,444,128	-		Pf6N2E2_4709	0.63	+0.1
5,444,128	-		Pf6N2E2_4709	0.63	+0.1
5,444,128	-		Pf6N2E2_4709	0.63	+0.1
5,444,317	-		Pf6N2E2_4709	0.68	-0.5
5,444,344	-		Pf6N2E2_4709	0.69	-0.9
5,444,511	-		Pf6N2E2_4709	0.74	+1.1
5,444,511	-		Pf6N2E2_4709	0.74	-0.5
5,444,551	-		Pf6N2E2_4709	0.75	-0.9
5,444,568	+		Pf6N2E2_4709	0.75	-0.5
5,444,568	+		Pf6N2E2_4709	0.75	-2.7
5,444,569	-		Pf6N2E2_4709	0.76	-0.6
5,444,880	-		Pf6N2E2_4709	0.85	-0.6
5,444,934	+		Pf6N2E2_4709	0.86	+0.4
5,444,979	+		Pf6N2E2_4709	0.87	+1.1
5,444,979	+		Pf6N2E2_4709	0.87	+0.1
5,445,018	+		Pf6N2E2_4709	0.89	+1.1
5,445,018	+		Pf6N2E2_4709	0.89	+0.1
5,445,018	+		Pf6N2E2_4709	0.89	+1.1
5,445,018	+		Pf6N2E2_4709	0.89	+2.1
5,445,018	+		Pf6N2E2_4709	0.89	+1.1
5,445,018	+		Pf6N2E2_4709	0.89	+0.1
5,445,019	-		Pf6N2E2_4709	0.89	-0.5
5,445,019	-		Pf6N2E2_4709	0.89	+1.1
5,445,019	-		Pf6N2E2_4709	0.89	+1.1
5,445,019	-		Pf6N2E2_4709	0.89	+0.1
5,445,019	-		Pf6N2E2_4709	0.89	-0.6
5,445,019	-		Pf6N2E2_4709	0.89	+1.1
5,445,019	-		Pf6N2E2_4709	0.89	-0.8
5,445,019	-		Pf6N2E2_4709	0.89	-0.5
5,445,028	+		Pf6N2E2_4709	0.89	+0.1
5,445,028	+		Pf6N2E2_4709	0.89	+1.1
5,445,168	+				+1.1
5,445,168	+				+1.1
5,445,168	+				+0.1
5,445,169	-				+0.1
5,445,169	-				+1.1
5,445,234	+				+1.1
5,445,234	+				+1.1
5,445,235	-				+0.1
5,445,235	-				-0.5
5,445,235	-				+0.1
5,445,261	+				+1.1
5,445,261	+				+1.1
5,445,261	+				-0.6
5,445,262	-				-0.5
5,445,262	-				-1.3
5,445,262	-				+0.1
5,445,279	-				-0.4
5,445,552	+		Pf6N2E2_4710	0.80	-0.5
5,445,552	+		Pf6N2E2_4710	0.80	-0.5
5,445,553	-		Pf6N2E2_4710	0.81	+0.1
5,445,577	+				+1.1
5,445,577	+				-0.5
5,445,577	+				+0.1
5,445,578	-				+0.1
5,445,578	-				+1.1
5,445,578	-				-1.5
5,445,751	+				+0.5
5,445,751	+				+0.5
5,445,751	+				+1.1
5,445,751	+				+0.1
5,445,751	+				-0.5
5,445,752	-				-0.5
5,445,752	-				-0.5
5,445,752	-				+0.1
5,445,841	+		Pf6N2E2_4711	0.15	+0.1
5,445,842	-		Pf6N2E2_4711	0.15	-0.5
5,445,842	-		Pf6N2E2_4711	0.15	+1.1
5,445,931	+		Pf6N2E2_4711	0.19	+1.1
5,445,931	+		Pf6N2E2_4711	0.19	+1.1
5,445,931	+		Pf6N2E2_4711	0.19	+0.1
5,446,091	-		Pf6N2E2_4711	0.28	-0.9
5,446,145	-		Pf6N2E2_4711	0.31	-0.5
5,446,151	-		Pf6N2E2_4711	0.31	-0.5
5,446,151	-		Pf6N2E2_4711	0.31	+1.1
5,446,151	-		Pf6N2E2_4711	0.31	-0.5
5,446,190	-		Pf6N2E2_4711	0.33	+1.1
5,446,190	-		Pf6N2E2_4711	0.33	+1.1
5,446,192	+		Pf6N2E2_4711	0.33	+0.1
5,446,192	+		Pf6N2E2_4711	0.33	+1.1
5,446,192	+		Pf6N2E2_4711	0.33	+0.1
5,446,192	+		Pf6N2E2_4711	0.33	+0.1
5,446,193	-		Pf6N2E2_4711	0.33	-0.5
5,446,193	-		Pf6N2E2_4711	0.33	+0.1
5,446,366	+		Pf6N2E2_4711	0.43	+0.1