Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3230

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
3,733,824	+				+1.0
3,733,828	-				-1.0
3,733,872	+				+1.0
3,733,873	-				-2.3
3,733,876	+				-0.0
3,733,921	-				-1.1
3,733,949	-				-0.5
3,733,957	+				+1.0
3,733,957	+				-1.6
3,733,957	+				+1.0
3,733,958	-				+1.0
3,733,963	+				-0.7
3,733,967	+				-0.7
3,733,967	+				-1.6
3,733,970	+				+1.0
3,733,970	+				+1.0
3,734,001	+				+1.0
3,734,001	+				+1.0
3,734,001	+				+1.0
3,734,001	+				-0.0
3,734,001	+				+1.0
3,734,001	+				+1.0
3,734,002	-				+1.0
3,734,002	-				+1.0
3,734,036	-				+1.0
3,734,164	+		Pf6N2E2_3229	0.24	-1.3
3,734,164	+		Pf6N2E2_3229	0.24	+1.0
3,734,164	+		Pf6N2E2_3229	0.24	+1.0
3,734,507	-		Pf6N2E2_3229	0.69	-0.7
3,734,849	+		Pf6N2E2_3230	0.11	-1.2
3,734,850	-		Pf6N2E2_3230	0.11	-0.0
3,734,850	-		Pf6N2E2_3230	0.11	-1.9
3,735,152	+		Pf6N2E2_3230	0.47	+1.0
3,735,152	+		Pf6N2E2_3230	0.47	-0.6
3,735,153	-		Pf6N2E2_3230	0.47	-0.6
3,735,153	-		Pf6N2E2_3230	0.47	-0.9
3,735,174	+		Pf6N2E2_3230	0.50	+0.2
3,735,245	+		Pf6N2E2_3230	0.58	-0.6
3,735,245	+		Pf6N2E2_3230	0.58	-0.6
3,735,245	+		Pf6N2E2_3230	0.58	-0.6
3,735,246	-		Pf6N2E2_3230	0.58	-1.0
3,735,293	+		Pf6N2E2_3230	0.64	+1.0
3,735,293	+		Pf6N2E2_3230	0.64	+1.0
3,735,430	+		Pf6N2E2_3230	0.80	-0.6
3,735,571	+				-0.6
3,735,583	+				+1.0
3,735,584	-				+1.0
3,735,726	+		Pf6N2E2_3231	0.13	-1.0
3,735,727	-		Pf6N2E2_3231	0.14	+1.0
3,735,727	-		Pf6N2E2_3231	0.14	+1.0
3,735,727	-		Pf6N2E2_3231	0.14	+1.0
3,736,200	+		Pf6N2E2_3231	0.66	-0.8
3,736,200	+		Pf6N2E2_3231	0.66	-0.3
3,736,200	+		Pf6N2E2_3231	0.66	-0.8
3,736,200	+		Pf6N2E2_3231	0.66	+1.0
3,736,201	-		Pf6N2E2_3231	0.66	-0.3
3,736,201	-		Pf6N2E2_3231	0.66	-0.9
3,736,201	-		Pf6N2E2_3231	0.66	-0.0
3,736,201	-		Pf6N2E2_3231	0.66	-0.0
3,736,222	-		Pf6N2E2_3231	0.68	+1.0
3,736,222	-		Pf6N2E2_3231	0.68	-0.0
3,736,251	+		Pf6N2E2_3231	0.72	-0.0
3,736,252	-		Pf6N2E2_3231	0.72	-0.0
3,736,457	-				-0.0
3,736,535	+				-0.6
3,736,536	-				+1.0