Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2849

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
3,338,874	-				-0.0
3,339,000	+		Pf6N2E2_2848	0.21	-1.7
3,339,000	+		Pf6N2E2_2848	0.21	-0.9
3,339,001	-		Pf6N2E2_2848	0.21	+1.0
3,339,001	-		Pf6N2E2_2848	0.21	+0.4
3,339,001	-		Pf6N2E2_2848	0.21	-0.0
3,339,001	-		Pf6N2E2_2848	0.21	+0.7
3,339,001	-		Pf6N2E2_2848	0.21	-1.2
3,339,001	-		Pf6N2E2_2848	0.21	+1.0
3,339,002	+		Pf6N2E2_2848	0.21	+1.0
3,339,002	+		Pf6N2E2_2848	0.21	+1.0
3,339,002	+		Pf6N2E2_2848	0.21	+1.0
3,339,002	+		Pf6N2E2_2848	0.21	-0.3
3,339,002	+		Pf6N2E2_2848	0.21	-0.3
3,339,003	-		Pf6N2E2_2848	0.21	-0.6
3,339,003	-		Pf6N2E2_2848	0.21	-0.6
3,339,003	-		Pf6N2E2_2848	0.21	+1.0
3,339,015	-		Pf6N2E2_2848	0.23	+1.0
3,339,062	+		Pf6N2E2_2848	0.27	-0.2
3,339,062	+		Pf6N2E2_2848	0.27	-0.0
3,339,062	+		Pf6N2E2_2848	0.27	-0.0
3,339,062	+		Pf6N2E2_2848	0.27	+1.0
3,339,062	+		Pf6N2E2_2848	0.27	-0.6
3,339,062	+		Pf6N2E2_2848	0.27	+1.0
3,339,063	-		Pf6N2E2_2848	0.27	-0.0
3,339,063	-		Pf6N2E2_2848	0.27	-0.4
3,339,063	-		Pf6N2E2_2848	0.27	+1.0
3,339,063	-		Pf6N2E2_2848	0.27	-0.0
3,339,063	-		Pf6N2E2_2848	0.27	+1.0
3,339,063	-		Pf6N2E2_2848	0.27	-1.0
3,339,063	-		Pf6N2E2_2848	0.27	-0.9
3,339,063	-		Pf6N2E2_2848	0.27	+1.0
3,339,063	-		Pf6N2E2_2848	0.27	-0.0
3,339,108	+		Pf6N2E2_2848	0.32	-1.2
3,339,108	+		Pf6N2E2_2848	0.32	+0.3
3,339,108	+		Pf6N2E2_2848	0.32	-0.0
3,339,108	+		Pf6N2E2_2848	0.32	-0.6
3,339,109	-		Pf6N2E2_2848	0.32	+0.4
3,339,109	-		Pf6N2E2_2848	0.32	-0.0
3,339,109	-		Pf6N2E2_2848	0.32	-0.6
3,339,110	+		Pf6N2E2_2848	0.32	-0.0
3,339,110	+		Pf6N2E2_2848	0.32	+1.0
3,339,110	+		Pf6N2E2_2848	0.32	-0.2
3,339,110	+		Pf6N2E2_2848	0.32	+1.0
3,339,110	+		Pf6N2E2_2848	0.32	+1.0
3,339,110	+		Pf6N2E2_2848	0.32	-1.3
3,339,111	-		Pf6N2E2_2848	0.32	-1.7
3,339,111	-		Pf6N2E2_2848	0.32	+1.0
3,339,111	-		Pf6N2E2_2848	0.32	+1.0
3,339,356	+		Pf6N2E2_2848	0.57	+1.0
3,339,357	-		Pf6N2E2_2848	0.57	-0.6
3,339,437	+		Pf6N2E2_2848	0.65	+1.0
3,339,437	+		Pf6N2E2_2848	0.65	+1.0
3,339,437	+		Pf6N2E2_2848	0.65	-0.6
3,339,438	-		Pf6N2E2_2848	0.65	-1.6
3,339,438	-		Pf6N2E2_2848	0.65	-1.5
3,339,703	+				+1.0
3,339,703	+				-0.0
3,339,704	-				+1.0
3,339,704	-				+2.6
3,339,793	+				-0.8
3,339,835	+				+0.0
3,339,835	+				+0.0
3,339,836	-				-0.4
3,339,836	-				+1.0
3,339,870	+				+1.0
3,339,871	-				-0.3
3,339,969	+		Pf6N2E2_2849	0.11	+1.0
3,339,969	+		Pf6N2E2_2849	0.11	-1.3
3,339,970	-		Pf6N2E2_2849	0.11	+0.0
3,340,155	+		Pf6N2E2_2849	0.32	+1.0
3,340,202	-		Pf6N2E2_2849	0.37	+0.0
3,340,620	-		Pf6N2E2_2849	0.83	+0.0
3,340,865	+				+0.0
3,340,865	+				-1.0
3,340,865	+				-1.0
3,340,865	+				+0.0
3,340,865	+				+0.7
3,340,866	-				+0.0
3,340,866	-				+0.0
3,340,866	-				+0.3
3,340,866	-				+0.0
3,340,878	+				+0.0
3,340,878	+				+1.0
3,340,878	+				+1.0
3,340,878	+				+0.0
3,340,879	-				+1.0
3,340,880	+				-1.2
3,340,880	+				-0.3
3,340,880	+				+1.0
3,340,880	+				+1.0
3,340,880	+				+0.0
3,340,880	+				+1.0
3,340,880	+				+1.0
3,340,880	+				-1.0
3,340,880	+				-1.0
3,340,880	+				-0.4
3,340,881	-				+1.0
3,340,881	-				+1.0
3,340,881	-				-0.7
3,340,881	-				+1.0
3,340,881	-				-0.6
3,341,113	-		Pf6N2E2_2850	0.39	-0.6
3,341,180	-		Pf6N2E2_2850	0.51	+0.0
3,341,180	-		Pf6N2E2_2850	0.51	-1.2
3,341,301	+		Pf6N2E2_2850	0.71	-1.0
3,341,301	+		Pf6N2E2_2850	0.71	-1.2
3,341,302	-		Pf6N2E2_2850	0.72	+1.0
3,341,302	-		Pf6N2E2_2850	0.72	+1.0
3,341,302	-		Pf6N2E2_2850	0.72	+0.7
3,341,436	-				-0.1
3,341,470	+				-0.3
3,341,494	+				+0.0
3,341,494	+				-0.6
3,341,518	+				+0.0
3,341,537	+				-0.6
3,341,538	-				+1.0
3,341,631	+				+1.0