Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1916

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
2,269,733	+				+0.9
2,269,733	+				-0.1
2,269,733	+				+0.9
2,269,734	-				-1.2
2,269,783	-				-0.1
2,269,797	+				+0.9
2,269,798	-				-1.5
2,269,839	-				-0.1
2,269,839	-				+0.9
2,269,996	-				+0.9
2,270,066	-				+0.9
2,270,109	-				+0.7
2,270,109	-				+0.9
2,270,109	-				+0.9
2,270,111	-				+0.9
2,270,208	+				+0.9
2,270,209	-				+0.9
2,270,209	-				+0.9
2,270,244	-				-0.1
2,270,461	-				+0.9
2,270,461	-				+0.9
2,270,461	-				+0.9
2,270,596	-				+0.9
2,270,596	-				-0.1
2,270,634	+				+0.9
2,270,657	-				-0.1
2,270,705	-				-0.1
2,270,705	-				+0.9
2,270,705	-				-0.7
2,270,705	-				+0.9
2,270,705	-				+0.9
2,270,705	-				+0.9
2,270,839	-		Pf6N2E2_1916	0.53	+0.9
2,270,839	-		Pf6N2E2_1916	0.53	-1.1
2,270,839	-		Pf6N2E2_1916	0.53	+0.9
2,270,860	+		Pf6N2E2_1916	0.60	-1.8
2,270,861	-		Pf6N2E2_1916	0.61	+0.9
2,270,861	-		Pf6N2E2_1916	0.61	-1.8
2,271,155	-		Pf6N2E2_1917	0.69	-0.1
2,271,156	+		Pf6N2E2_1917	0.70	+0.9
2,271,157	-		Pf6N2E2_1917	0.70	-0.1
2,271,157	-		Pf6N2E2_1917	0.70	+0.9
2,271,256	+				+0.9
2,271,257	-				+0.9
2,271,257	-				-0.7
2,271,272	-				+0.9
2,271,398	+				-0.9
2,271,425	-				+0.9
2,271,441	-				-0.1
2,271,571	-				-0.1
2,271,725	-				+0.9
2,271,725	-				-0.7
2,271,725	-				-0.1
2,271,727	-				+0.9
2,271,727	-				-0.7
2,271,737	-				-0.1
2,271,828	-				-0.8
2,271,828	-				-0.1
2,271,828	-				-0.1
2,271,828	-				-0.1
2,271,828	-				-1.1
2,271,828	-				+0.9
2,271,840	+				+0.9
2,271,841	-				-0.6
2,271,841	-				+0.9
2,271,846	-				+0.9
2,271,928	+		Pf6N2E2_1918	0.16	+0.9
2,271,968	-		Pf6N2E2_1918	0.20	+0.9