Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6093

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
6,915,918	+				-0.6
6,915,918	+				-1.5
6,915,919	-				+1.0
6,916,334	+				+1.0
6,916,335	-				-0.6
6,916,335	-				-1.0
6,916,378	+				+0.0
6,916,379	-				+0.0
6,916,379	-				+1.0
6,916,466	+				+1.0
6,916,477	-				+1.0
6,916,523	+				+0.0
6,916,523	+				+1.0
6,916,524	-				+0.0
6,916,524	-				+0.0
6,916,542	+				+0.0
6,916,573	+				+1.7
6,916,694	+				+1.0
6,916,694	+				+1.0
6,916,694	+				+1.0
6,916,733	+				-0.6
6,916,734	-				+0.0
6,916,802	+				-0.4
6,916,802	+				+0.0
6,916,803	-				+1.0
6,916,867	-				-0.6
6,916,867	-				+1.0
6,916,918	+		Pf6N2E2_6093	0.13	+1.0
6,916,918	+		Pf6N2E2_6093	0.13	+1.0
6,916,919	-		Pf6N2E2_6093	0.13	-2.6
6,916,919	-		Pf6N2E2_6093	0.13	+1.0
6,917,221	+				+1.0
6,917,544	-				+1.0
6,917,897	+		Pf6N2E2_6094	0.31	-0.6
6,917,898	-		Pf6N2E2_6094	0.31	+0.1
6,917,898	-		Pf6N2E2_6094	0.31	+0.0
6,917,898	-		Pf6N2E2_6094	0.31	+1.0
6,918,042	+		Pf6N2E2_6094	0.40	+0.0
6,918,132	-		Pf6N2E2_6094	0.45	-1.0
6,918,146	+		Pf6N2E2_6094	0.46	+1.0