Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5441

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
6,247,400	-				-0.6
6,247,400	-				+1.0
6,247,400	-				+0.7
6,247,536	-				+0.2
6,247,546	+				+1.0
6,247,547	-				-0.3
6,247,547	-				-0.0
6,247,547	-				+1.0
6,247,568	+				+1.0
6,247,568	+				-0.0
6,247,568	+				+1.0
6,247,568	+				-0.8
6,247,577	+				-0.0
6,247,577	+				-0.0
6,247,577	+				-1.0
6,247,577	+				+1.0
6,247,577	+				+1.0
6,247,577	+				+1.0
6,247,578	-				-0.6
6,247,578	-				+1.0
6,247,578	-				-0.0
6,247,578	-				-0.0
6,247,589	+				+1.0
6,247,589	+				+1.0
6,247,590	-				-0.6
6,247,590	-				-0.6
6,247,626	+				+1.0
6,247,626	+				-0.0
6,247,627	-				-0.6
6,247,627	-				+1.0
6,247,652	+				+1.0
6,247,653	-				-0.0
6,247,661	+				-0.0
6,247,661	+				-0.9
6,247,661	+				+1.0
6,247,662	-				-0.6
6,247,662	-				+1.0
6,247,662	-				-0.0
6,247,662	-				+1.0
6,247,662	-				-1.6
6,247,687	+				-0.1
6,247,688	-				-0.0
6,247,688	-				+1.0
6,247,688	-				-0.8
6,247,748	+				+1.0
6,247,748	+				+1.0
6,247,749	-				+1.0
6,247,749	-				-0.0
6,247,749	-				-0.0
6,247,962	-				-0.0
6,247,962	-				+1.0
6,247,962	-				-0.0
6,247,962	-				-0.5
6,247,962	-				-0.3
6,248,093	+		Pf6N2E2_5441	0.15	-1.0
6,248,093	+		Pf6N2E2_5441	0.15	-0.0
6,248,094	-		Pf6N2E2_5441	0.15	-1.3
6,248,216	+		Pf6N2E2_5441	0.68	-2.2
6,248,216	+		Pf6N2E2_5441	0.68	-0.0
6,248,216	+		Pf6N2E2_5441	0.68	-1.2
6,248,216	+		Pf6N2E2_5441	0.68	-0.6
6,248,216	+		Pf6N2E2_5441	0.68	+1.0
6,248,216	+		Pf6N2E2_5441	0.68	-0.8
6,248,217	-		Pf6N2E2_5441	0.68	+1.0
6,248,217	-		Pf6N2E2_5441	0.68	-0.0
6,248,217	-		Pf6N2E2_5441	0.68	+1.0
6,248,217	-		Pf6N2E2_5441	0.68	+1.0
6,248,313	+				-0.8
6,248,356	+				-1.3
6,248,356	+				+1.0
6,248,356	+				+1.0
6,248,357	-				+1.0
6,248,357	-				+1.0
6,248,357	-				+1.0
6,248,436	-				+1.0
6,248,436	-				-1.3
6,248,492	+				+1.0
6,248,734	+				+1.0
6,248,734	+				+1.0
6,248,734	+				-0.0
6,248,734	+				-1.0
6,248,735	-				+1.0
6,248,735	-				+1.0
6,248,735	-				+1.0
6,248,743	+				-0.0
6,248,743	+				+0.3
6,248,743	+				+1.0
6,248,743	+				-0.0
6,248,743	+				+1.0
6,248,743	+				+1.0
6,248,744	-				-1.8
6,248,744	-				-0.0
6,248,744	-				+1.0
6,248,744	-				-1.0
6,248,762	-				+1.0
6,248,784	+				-0.9
6,248,785	-				+1.0
6,248,785	-				-0.0
6,248,785	-				+1.0
6,248,785	-				+1.0
6,248,785	-				+0.2
6,248,849	+				+1.0
6,248,849	+				+1.0
6,248,849	+				-0.6
6,248,849	+				+1.0
6,248,849	+				+1.0
6,248,850	-				+1.0
6,248,850	-				-0.0
6,248,850	-				-0.0
6,248,850	-				+1.0
6,248,850	-				+1.0
6,248,850	-				-0.6
6,248,914	+				-1.2
6,248,914	+				+1.0
6,248,914	+				-0.4
6,248,914	+				+1.0
6,248,915	-				-0.6
6,248,915	-				-0.0