Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3495

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
4,076,129	+				+1.0
4,076,130	-				+0.0
4,076,130	-				-2.2
4,076,212	-				-0.6
4,076,461	+		Pf6N2E2_3494	0.35	+1.0
4,076,461	+		Pf6N2E2_3494	0.35	-0.2
4,076,462	-		Pf6N2E2_3494	0.35	+0.0
4,076,718	+		Pf6N2E2_3494	0.65	+1.0
4,076,739	+		Pf6N2E2_3494	0.68	-0.6
4,076,739	+		Pf6N2E2_3494	0.68	-0.6
4,076,739	+		Pf6N2E2_3494	0.68	+1.0
4,076,740	-		Pf6N2E2_3494	0.68	+2.0
4,076,740	-		Pf6N2E2_3494	0.68	+2.0
4,076,984	+				+1.0
4,076,984	+				-0.9
4,076,984	+				-0.6
4,076,985	-				-0.6
4,076,985	-				+0.0
4,076,985	-				+0.0
4,076,985	-				+1.0
4,076,985	-				+0.0
4,076,985	-				-1.6
4,076,985	-				-1.3
4,076,985	-				+0.0
4,076,989	+				-0.7
4,076,989	+				+1.0
4,076,989	+				-0.9
4,076,989	+				+0.0
4,077,120	+				+0.0
4,077,121	-				+0.0
4,077,235	+		Pf6N2E2_3495	0.23	-1.6
4,077,236	-		Pf6N2E2_3495	0.23	+0.0
4,077,273	+		Pf6N2E2_3495	0.30	-0.6
4,077,274	-		Pf6N2E2_3495	0.30	+1.0
4,077,274	-		Pf6N2E2_3495	0.30	+0.0
4,077,274	-		Pf6N2E2_3495	0.30	-0.2
4,077,274	-		Pf6N2E2_3495	0.30	+0.0
4,077,274	-		Pf6N2E2_3495	0.30	+1.0
4,077,297	+		Pf6N2E2_3495	0.34	-1.5
4,077,297	+		Pf6N2E2_3495	0.34	-0.4
4,077,349	-		Pf6N2E2_3495	0.44	-1.0
4,077,349	-		Pf6N2E2_3495	0.44	-0.8
4,077,391	-		Pf6N2E2_3495	0.51	+1.0
4,077,391	-		Pf6N2E2_3495	0.51	-0.6
4,077,391	-		Pf6N2E2_3495	0.51	+0.0
4,077,522	+		Pf6N2E2_3495	0.75	+1.0
4,077,604	+		Pf6N2E2_3495	0.90	+1.0
4,077,680	-				+0.0
4,077,680	-				-1.2
4,077,848	+		Pf6N2E2_3496	0.27	+0.0
4,077,849	-		Pf6N2E2_3496	0.27	+1.0
4,077,849	-		Pf6N2E2_3496	0.27	+0.0
4,077,849	-		Pf6N2E2_3496	0.27	+1.0
4,077,875	+		Pf6N2E2_3496	0.31	+1.0
4,077,875	+		Pf6N2E2_3496	0.31	+0.0
4,077,875	+		Pf6N2E2_3496	0.31	+0.0
4,077,875	+		Pf6N2E2_3496	0.31	+1.0
4,077,875	+		Pf6N2E2_3496	0.31	-0.9
4,077,876	-		Pf6N2E2_3496	0.31	+1.0
4,077,876	-		Pf6N2E2_3496	0.31	-1.1
4,077,876	-		Pf6N2E2_3496	0.31	+0.0
4,077,876	-		Pf6N2E2_3496	0.31	+1.0
4,077,923	+		Pf6N2E2_3496	0.39	-0.6
4,077,924	-		Pf6N2E2_3496	0.39	+0.0
4,077,924	-		Pf6N2E2_3496	0.39	-1.0
4,077,924	-		Pf6N2E2_3496	0.39	+0.0
4,077,926	+		Pf6N2E2_3496	0.39	+0.0
4,077,926	+		Pf6N2E2_3496	0.39	-2.0
4,077,927	-		Pf6N2E2_3496	0.40	-0.6
4,077,927	-		Pf6N2E2_3496	0.40	-1.1
4,077,938	+		Pf6N2E2_3496	0.41	-0.6
4,077,938	+		Pf6N2E2_3496	0.41	+0.0
4,077,938	+		Pf6N2E2_3496	0.41	-0.2
4,077,938	+		Pf6N2E2_3496	0.41	+0.0
4,077,938	+		Pf6N2E2_3496	0.41	+1.0
4,077,938	+		Pf6N2E2_3496	0.41	+0.0
4,077,938	+		Pf6N2E2_3496	0.41	+1.0
4,077,938	+		Pf6N2E2_3496	0.41	-0.4
4,077,939	-		Pf6N2E2_3496	0.42	-1.0
4,077,939	-		Pf6N2E2_3496	0.42	+1.0
4,077,939	-		Pf6N2E2_3496	0.42	-0.6
4,077,939	-		Pf6N2E2_3496	0.42	-0.6
4,078,142	+		Pf6N2E2_3496	0.74	+1.0
4,078,143	-		Pf6N2E2_3496	0.75	-1.2
4,078,232	+		Pf6N2E2_3496	0.89	+0.0
4,078,232	+		Pf6N2E2_3496	0.89	+1.0
4,078,233	-		Pf6N2E2_3496	0.89	+0.0
4,078,233	-		Pf6N2E2_3496	0.89	+1.0
4,078,340	+				+0.0
4,078,341	-				-0.2
4,078,341	-				+1.0
4,078,341	-				-2.2
4,078,437	+		Pf6N2E2_3497	0.17	+0.7
4,078,437	+		Pf6N2E2_3497	0.17	+0.0
4,078,437	+		Pf6N2E2_3497	0.17	+1.0
4,078,437	+		Pf6N2E2_3497	0.17	+0.0
4,078,438	-		Pf6N2E2_3497	0.17	+0.0
4,078,438	-		Pf6N2E2_3497	0.17	+0.3
4,078,438	-		Pf6N2E2_3497	0.17	+0.0
4,078,438	-		Pf6N2E2_3497	0.17	+1.0
4,078,438	-		Pf6N2E2_3497	0.17	+0.0
4,078,438	-		Pf6N2E2_3497	0.17	+1.0
4,078,439	+		Pf6N2E2_3497	0.17	+1.0
4,078,439	+		Pf6N2E2_3497	0.17	-0.6
4,078,439	+		Pf6N2E2_3497	0.17	-0.2
4,078,439	+		Pf6N2E2_3497	0.17	+0.0
4,078,439	+		Pf6N2E2_3497	0.17	+0.0
4,078,439	+		Pf6N2E2_3497	0.17	+1.0
4,078,439	+		Pf6N2E2_3497	0.17	-1.0
4,078,439	+		Pf6N2E2_3497	0.17	+0.0
4,078,439	+		Pf6N2E2_3497	0.17	+0.4
4,078,439	+		Pf6N2E2_3497	0.17	-0.6
4,078,439	+		Pf6N2E2_3497	0.17	+1.0
4,078,440	-		Pf6N2E2_3497	0.17	+0.0
4,078,440	-		Pf6N2E2_3497	0.17	+0.0
4,078,440	-		Pf6N2E2_3497	0.17	+1.0
4,078,440	-		Pf6N2E2_3497	0.17	+0.0
4,078,440	-		Pf6N2E2_3497	0.17	+1.0
4,078,440	-		Pf6N2E2_3497	0.17	+0.0
4,078,440	-		Pf6N2E2_3497	0.17	-0.4
4,078,440	-		Pf6N2E2_3497	0.17	-1.0
4,078,440	-		Pf6N2E2_3497	0.17	+0.0
4,078,440	-		Pf6N2E2_3497	0.17	+1.0
4,078,440	-		Pf6N2E2_3497	0.17	+1.0
4,078,440	-		Pf6N2E2_3497	0.17	+1.0
4,078,440	-		Pf6N2E2_3497	0.17	-0.6
4,078,440	-		Pf6N2E2_3497	0.17	+0.7
4,078,440	-		Pf6N2E2_3497	0.17	-2.2
4,078,440	-		Pf6N2E2_3497	0.17	-0.2
4,078,440	-		Pf6N2E2_3497	0.17	-1.8
4,078,440	-		Pf6N2E2_3497	0.17	-1.6
4,078,608	-		Pf6N2E2_3497	0.39	+1.0
4,078,628	+		Pf6N2E2_3497	0.42	-0.8
4,078,629	-		Pf6N2E2_3497	0.42	-0.8