Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2161

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
2,564,029	+				-0.6
2,564,080	-				-1.1
2,564,089	+				+0.9
2,564,089	+				-0.1
2,564,089	+				+0.9
2,564,090	-				-0.6
2,564,090	-				-0.1
2,564,118	+				+0.9
2,564,118	+				+0.9
2,564,156	+				-0.1
2,564,156	+				-0.6
2,564,156	+				-0.9
2,564,156	+				+0.9
2,564,156	+				-1.1
2,564,157	-				+0.9
2,564,157	-				-0.1
2,564,220	-		Pf6N2E2_2160	0.18	-1.6
2,564,240	+		Pf6N2E2_2160	0.21	-0.7
2,564,241	-		Pf6N2E2_2160	0.21	+0.9
2,564,241	-		Pf6N2E2_2160	0.21	-0.1
2,564,374	-		Pf6N2E2_2160	0.39	-1.3
2,564,374	-		Pf6N2E2_2160	0.39	+0.9
2,564,374	-		Pf6N2E2_2160	0.39	+0.9
2,564,374	-		Pf6N2E2_2160	0.39	+0.9
2,564,374	-		Pf6N2E2_2160	0.39	-0.6
2,564,492	+		Pf6N2E2_2160	0.56	+0.9
2,564,492	+		Pf6N2E2_2160	0.56	-0.9
2,564,493	-		Pf6N2E2_2160	0.56	-0.6
2,564,493	-		Pf6N2E2_2160	0.56	+0.9
2,564,493	-		Pf6N2E2_2160	0.56	+0.9
2,564,493	-		Pf6N2E2_2160	0.56	-1.6
2,564,495	+		Pf6N2E2_2160	0.56	-0.8
2,564,495	+		Pf6N2E2_2160	0.56	-0.1
2,564,496	-		Pf6N2E2_2160	0.56	-0.6
2,564,496	-		Pf6N2E2_2160	0.56	+0.9
2,564,496	-		Pf6N2E2_2160	0.56	+0.9
2,564,496	-		Pf6N2E2_2160	0.56	+0.9
2,564,496	-		Pf6N2E2_2160	0.56	-0.6
2,564,569	-		Pf6N2E2_2160	0.67	-2.2
2,564,978	+				+0.9
2,564,978	+				-0.6
2,564,978	+				-0.1
2,564,978	+				-0.1
2,564,978	+				+0.9
2,565,035	+		Pf6N2E2_2161	0.11	-0.1
2,565,110	+		Pf6N2E2_2161	0.23	-0.1
2,565,110	+		Pf6N2E2_2161	0.23	-0.4
2,565,110	+		Pf6N2E2_2161	0.23	+0.9
2,565,111	-		Pf6N2E2_2161	0.23	-0.6
2,565,111	-		Pf6N2E2_2161	0.23	-0.1
2,565,135	-		Pf6N2E2_2161	0.27	+0.9
2,565,135	-		Pf6N2E2_2161	0.27	-1.9
2,565,346	-		Pf6N2E2_2161	0.61	-0.6
2,565,346	-		Pf6N2E2_2161	0.61	+0.9
2,565,500	+		Pf6N2E2_2161	0.86	+0.4
2,565,501	-		Pf6N2E2_2161	0.86	-0.6
2,565,710	-				+0.9
2,565,710	-				-0.1
2,565,719	-				+0.9
2,565,724	+				+0.9
2,565,725	-				-2.1
2,565,725	-				+0.9
2,565,741	-				-0.6
2,565,747	-				-0.6
2,565,779	-				-1.3
2,565,779	-				+0.9
2,565,815	-				+0.9
2,565,815	-				+0.9
2,565,815	-				+0.9
2,565,891	-				+0.9
2,566,095	+				-1.5
2,566,110	+				+0.9
2,566,120	-				+0.9
2,566,270	+		Pf6N2E2_2162	0.12	-0.7
2,566,270	+		Pf6N2E2_2162	0.12	-0.7