Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1220

Experiment: Ying_Nucleobase14 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 1
1,426,377	-		Pf6N2E2_1219	0.38	+0.5
1,426,568	-		Pf6N2E2_1219	0.54	+0.8
1,426,568	-		Pf6N2E2_1219	0.54	+0.8
1,426,575	+		Pf6N2E2_1219	0.55	-1.6
1,426,625	+		Pf6N2E2_1219	0.59	+0.8
1,426,626	-		Pf6N2E2_1219	0.59	+0.8
1,426,727	+		Pf6N2E2_1219	0.67	+0.8
1,426,727	+		Pf6N2E2_1219	0.67	+0.8
1,426,775	+		Pf6N2E2_1219	0.71	+0.8
1,426,775	+		Pf6N2E2_1219	0.71	-0.2
1,426,886	+		Pf6N2E2_1219	0.81	+0.8
1,426,886	+		Pf6N2E2_1219	0.81	-2.0
1,426,887	-		Pf6N2E2_1219	0.81	+0.8
1,426,887	-		Pf6N2E2_1219	0.81	+0.8
1,426,940	+		Pf6N2E2_1219	0.85	-0.6
1,426,940	+		Pf6N2E2_1219	0.85	+1.8
1,426,940	+		Pf6N2E2_1219	0.85	-0.4
1,426,941	-		Pf6N2E2_1219	0.85	-1.2
1,426,991	+		Pf6N2E2_1219	0.90	+0.8
1,426,991	+		Pf6N2E2_1219	0.90	+0.8
1,426,991	+		Pf6N2E2_1219	0.90	+0.8
1,426,992	-		Pf6N2E2_1219	0.90	-0.2
1,426,992	-		Pf6N2E2_1219	0.90	-0.2
1,427,063	+				+0.8
1,427,064	-				+0.8
1,427,064	-				-0.2
1,427,064	-				+0.2
1,427,231	+		Pf6N2E2_1220	0.32	+0.8
1,427,231	+		Pf6N2E2_1220	0.32	+0.8
1,427,232	-		Pf6N2E2_1220	0.33	-0.2
1,427,232	-		Pf6N2E2_1220	0.33	-2.5
1,427,260	-		Pf6N2E2_1220	0.50	-0.2
1,427,310	+		Pf6N2E2_1220	0.81	-1.6
1,427,727	-				+0.8
1,427,727	-				-0.2
1,427,727	-				+0.8
1,427,936	+		Pf6N2E2_1221	0.21	+0.8
1,427,996	+		Pf6N2E2_1221	0.25	+0.8
1,427,996	+		Pf6N2E2_1221	0.25	+0.5
1,428,052	+		Pf6N2E2_1221	0.29	-0.2
1,428,053	-		Pf6N2E2_1221	0.29	-0.2