Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_894

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
1,046,321	+				+0.9
1,046,339	-				-0.1
1,046,339	-				-0.1
1,046,339	-				-0.4
1,046,382	-				-0.1
1,046,557	+				-0.1
1,046,557	+				-0.1
1,046,558	-				-0.8
1,046,578	+				+0.9
1,046,578	+				+0.9
1,046,578	+				+0.9
1,046,578	+				+0.9
1,046,578	+				-0.1
1,046,578	+				-1.4
1,046,578	+				-1.2
1,046,578	+				+0.9
1,046,578	+				+0.8
1,046,578	+				+0.9
1,046,578	+				+0.9
1,046,578	+				+0.9
1,046,579	-				-0.1
1,046,579	-				-0.1
1,046,579	-				-0.7
1,046,579	-				+0.9
1,046,579	-				+0.9
1,046,658	-				+0.9
1,046,761	-				-0.1
1,046,768	-				+0.9
1,046,807	+				-0.7
1,046,808	-				-0.7
1,046,808	-				+0.9
1,046,912	+				-1.4
1,046,912	+				-0.1
1,046,912	+				+0.9
1,047,004	+				+0.9
1,047,004	+				+0.9
1,047,005	-				+0.9
1,047,005	-				+0.9
1,047,053	+				+0.9
1,047,053	+				-1.1
1,047,054	-				-1.1
1,047,103	+				+0.9
1,047,103	+				+0.9
1,047,266	+				-0.1
1,047,266	+				-1.4
1,047,267	-				-1.8
1,047,267	-				+0.9
1,047,267	-				+0.9
1,047,318	+				+0.9
1,047,319	-				+0.2
1,047,319	-				-0.1
1,047,509	+		Pf6N2E2_894	0.26	+0.9
1,047,509	+		Pf6N2E2_894	0.26	+0.9
1,047,509	+		Pf6N2E2_894	0.26	+0.9
1,047,510	-		Pf6N2E2_894	0.26	+0.9
1,047,510	-		Pf6N2E2_894	0.26	-1.4
1,047,555	+		Pf6N2E2_894	0.31	+0.9
1,047,556	-		Pf6N2E2_894	0.31	+0.9
1,047,556	-		Pf6N2E2_894	0.31	-0.1
1,047,591	+		Pf6N2E2_894	0.35	+0.9
1,047,592	-		Pf6N2E2_894	0.35	+0.9
1,047,592	-		Pf6N2E2_894	0.35	-2.2
1,047,630	+		Pf6N2E2_894	0.39	+0.9
1,047,631	-		Pf6N2E2_894	0.40	-0.7
1,047,657	+		Pf6N2E2_894	0.42	+0.9
1,047,657	+		Pf6N2E2_894	0.42	+0.9
1,047,657	+		Pf6N2E2_894	0.42	-0.1
1,047,657	+		Pf6N2E2_894	0.42	+0.9
1,047,658	-		Pf6N2E2_894	0.43	-0.7
1,047,804	+		Pf6N2E2_894	0.59	+0.9
1,047,805	-		Pf6N2E2_894	0.59	+0.9
1,047,871	-		Pf6N2E2_894	0.67	+0.9
1,047,910	+		Pf6N2E2_894	0.71	-0.9
1,048,098	+				+0.9
1,048,098	+				+0.9
1,048,098	+				+0.9
1,048,099	-				+0.9
1,048,116	+				-1.0
1,048,116	+				-0.4
1,048,137	+				-0.7
1,048,190	+				+0.9
1,048,191	-				+0.9
1,048,191	-				+0.9
1,048,191	-				+0.9
1,048,293	+				-0.5
1,048,293	+				+0.9
1,048,293	+				-1.1
1,048,293	+				+0.9
1,048,293	+				+0.9
1,048,293	+				+0.9
1,048,293	+				-0.7
1,048,294	-				-0.1
1,048,294	-				+0.9
1,048,294	-				-0.1
1,048,295	+				-0.1
1,048,295	+				+0.9
1,048,295	+				-1.1
1,048,295	+				-0.1
1,048,295	+				-0.4
1,048,295	+				+0.9
1,048,295	+				-1.1
1,048,295	+				-0.1
1,048,295	+				+0.9
1,048,296	-				+0.9
1,048,296	-				+0.9
1,048,296	-				+0.9
1,048,296	-				+0.9
1,048,296	-				+0.9
1,048,296	-				+0.9
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				-0.1
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				-1.1
1,048,297	+				-0.1
1,048,297	+				-0.4
1,048,297	+				-0.7
1,048,297	+				-0.8
1,048,297	+				-0.7
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,297	+				-2.3
1,048,297	+				+0.9
1,048,297	+				-1.7
1,048,297	+				-0.1
1,048,297	+				+0.9
1,048,297	+				+0.9
1,048,298	-				-0.9
1,048,298	-				+0.9
1,048,298	-				-0.1
1,048,298	-				-0.9
1,048,298	-				+0.9
1,048,298	-				+0.9
1,048,298	-				-1.1
1,048,298	-				-0.9
1,048,298	-				-1.3
1,048,298	-				+0.9
1,048,298	-				+0.9
1,048,301	+				-0.7
1,048,301	+				+0.9
1,048,301	+				+0.9
1,048,301	+				+0.5
1,048,301	+				+0.9
1,048,301	+				-0.1
1,048,302	-				-1.4
1,048,302	-				+0.9
1,048,302	-				+0.9
1,048,302	-				+0.9
1,048,302	-				+0.9
1,048,302	-				+0.9
1,048,305	+				+1.7
1,048,305	+				-0.1
1,048,305	+				+0.9
1,048,306	-				-0.7
1,048,306	-				-0.7
1,048,306	-				+0.9
1,048,306	-				+0.9
1,048,306	-				-0.7
1,048,313	+				+0.9
1,048,313	+				-1.4
1,048,314	-				+0.9
1,048,375	+				-0.1
1,048,376	-				+0.9
1,048,482	+				-1.1
1,048,482	+				+0.9
1,048,482	+				+0.9
1,048,485	+				+0.9
1,048,528	+				+0.9
1,048,529	-				+0.9
1,048,529	-				+0.2
1,048,529	-				+0.9
1,048,529	-				+0.9
1,048,645	-		Pf6N2E2_895	0.23	+0.9
1,048,768	+		Pf6N2E2_895	0.48	+0.9
1,048,768	+		Pf6N2E2_895	0.48	+0.9
1,048,795	+		Pf6N2E2_895	0.54	-0.1
1,048,795	+		Pf6N2E2_895	0.54	+0.9
1,048,795	+		Pf6N2E2_895	0.54	-0.7
1,048,818	+		Pf6N2E2_895	0.59	+0.9
1,048,818	+		Pf6N2E2_895	0.59	+0.9
1,048,819	-		Pf6N2E2_895	0.59	+0.9
1,048,930	+		Pf6N2E2_895	0.82	-1.1
1,048,930	+		Pf6N2E2_895	0.82	+0.9
1,048,930	+		Pf6N2E2_895	0.82	+0.9
1,048,930	+		Pf6N2E2_895	0.82	+0.9
1,048,935	+		Pf6N2E2_895	0.83	-1.4
1,049,013	-				+0.9
1,049,016	+				-0.1
1,049,016	+				+0.9
1,049,016	+				+0.9
1,049,016	+				+0.9
1,049,016	+				+0.6
1,049,016	+				+0.9
1,049,016	+				-0.1
1,049,017	-				+0.9
1,049,017	-				-1.7
1,049,017	-				-1.1
1,049,017	-				-0.7
1,049,017	-				-0.1
1,049,017	-				-0.7
1,049,063	-				-2.3
1,049,076	+				+0.9
1,049,077	-				+0.9
1,049,161	+				+0.9
1,049,161	+				+0.9
1,049,162	-				-0.7