Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6013

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
6,830,982	-		Pf6N2E2_6012	0.58	+1.0
6,830,982	-		Pf6N2E2_6012	0.58	-0.0
6,830,982	-		Pf6N2E2_6012	0.58	+1.0
6,831,023	-		Pf6N2E2_6012	0.62	-1.0
6,831,023	-		Pf6N2E2_6012	0.62	+1.0
6,831,026	+		Pf6N2E2_6012	0.62	-1.0
6,831,026	+		Pf6N2E2_6012	0.62	+1.0
6,831,027	-		Pf6N2E2_6012	0.62	+1.0
6,831,051	-		Pf6N2E2_6012	0.64	+1.0
6,831,067	-		Pf6N2E2_6012	0.65	-1.0
6,831,067	-		Pf6N2E2_6012	0.65	-0.3
6,831,067	-		Pf6N2E2_6012	0.65	+1.0
6,831,067	-		Pf6N2E2_6012	0.65	+1.0
6,831,067	-		Pf6N2E2_6012	0.65	+1.0
6,831,067	-		Pf6N2E2_6012	0.65	-0.6
6,831,067	-		Pf6N2E2_6012	0.65	-0.0
6,831,067	-		Pf6N2E2_6012	0.65	+1.0
6,831,138	+		Pf6N2E2_6012	0.71	+1.0
6,831,138	+		Pf6N2E2_6012	0.71	+1.0
6,831,139	-		Pf6N2E2_6012	0.71	+1.0
6,831,321	-		Pf6N2E2_6012	0.86	+1.0
6,831,321	-		Pf6N2E2_6012	0.86	+1.0
6,831,321	-		Pf6N2E2_6012	0.86	+1.0
6,831,373	-		Pf6N2E2_6012	0.90	-1.4
6,831,418	-				+1.0
6,831,537	-				-0.3
6,831,555	-				-0.6
6,831,662	-				+1.0
6,831,667	+				+1.0
6,831,667	+				+1.0
6,831,667	+				-0.0
6,831,667	+				-0.0
6,831,667	+				+1.0
6,831,668	-				+1.0
6,831,668	-				+1.0
6,831,679	+				-1.2
6,831,680	-				+1.0
6,831,814	+				-1.2
6,831,814	+				+1.0
6,831,814	+				+0.4
6,831,872	+				-0.7
6,831,884	+				-0.0
6,831,884	+				+1.0
6,831,884	+				+1.0
6,831,885	-				+1.0
6,831,885	-				-1.1
6,831,885	-				+0.4
6,831,893	+				-0.0
6,831,894	-				-1.0
6,832,008	-				+1.0
6,832,099	+		Pf6N2E2_6013	0.14	+1.0
6,832,099	+		Pf6N2E2_6013	0.14	-0.0
6,832,099	+		Pf6N2E2_6013	0.14	-0.0
6,832,100	-		Pf6N2E2_6013	0.14	+1.0
6,832,100	-		Pf6N2E2_6013	0.14	+1.0
6,832,100	-		Pf6N2E2_6013	0.14	-0.6
6,832,100	-		Pf6N2E2_6013	0.14	-1.9
6,832,100	-		Pf6N2E2_6013	0.14	+1.0
6,832,143	+		Pf6N2E2_6013	0.18	-0.0
6,832,277	+		Pf6N2E2_6013	0.29	+1.0
6,832,277	+		Pf6N2E2_6013	0.29	-0.0
6,832,472	+		Pf6N2E2_6013	0.45	+1.0
6,832,647	-		Pf6N2E2_6013	0.60	+1.0
6,832,647	-		Pf6N2E2_6013	0.60	-0.0
6,832,670	+		Pf6N2E2_6013	0.62	-1.3
6,832,670	+		Pf6N2E2_6013	0.62	-0.0
6,832,670	+		Pf6N2E2_6013	0.62	-0.0
6,832,880	+		Pf6N2E2_6013	0.79	+1.0
6,832,880	+		Pf6N2E2_6013	0.79	-0.0
6,832,880	+		Pf6N2E2_6013	0.79	-1.3
6,832,881	-		Pf6N2E2_6013	0.79	+1.0
6,832,962	-		Pf6N2E2_6013	0.86	-0.4
6,832,974	+		Pf6N2E2_6013	0.87	-0.0
6,833,038	+				-0.0
6,833,038	+				-1.0
6,833,039	-				+0.6
6,833,151	+				-0.0
6,833,152	-				+1.0
6,833,346	+				-0.6
6,833,427	+				-0.6
6,833,427	+				+1.0
6,833,430	+				-0.0
6,833,430	+				-0.6
6,833,430	+				+1.0
6,833,430	+				+1.0
6,833,437	+				+1.0
6,833,506	+		Pf6N2E2_6014	0.17	-0.0
6,833,506	+		Pf6N2E2_6014	0.17	+1.2
6,833,507	-		Pf6N2E2_6014	0.17	-0.0
6,833,597	+		Pf6N2E2_6014	0.38	-0.6
6,833,597	+		Pf6N2E2_6014	0.38	+1.0
6,833,598	-		Pf6N2E2_6014	0.38	-1.5
6,833,599	+		Pf6N2E2_6014	0.38	+1.0
6,833,599	+		Pf6N2E2_6014	0.38	-1.3
6,833,599	+		Pf6N2E2_6014	0.38	-0.0
6,833,750	+		Pf6N2E2_6014	0.73	-1.6
6,833,750	+		Pf6N2E2_6014	0.73	+1.0
6,833,762	+		Pf6N2E2_6014	0.75	-0.5
6,833,762	+		Pf6N2E2_6014	0.75	+1.0
6,833,762	+		Pf6N2E2_6014	0.75	-0.0
6,833,762	+		Pf6N2E2_6014	0.75	-0.9
6,833,763	-		Pf6N2E2_6014	0.76	+1.0
6,833,763	-		Pf6N2E2_6014	0.76	-0.7
6,833,763	-		Pf6N2E2_6014	0.76	-1.3
6,833,763	-		Pf6N2E2_6014	0.76	-0.7
6,833,763	-		Pf6N2E2_6014	0.76	+1.0
6,833,825	+		Pf6N2E2_6014	0.90	+1.0
6,833,825	+		Pf6N2E2_6014	0.90	+1.0
6,833,825	+		Pf6N2E2_6014	0.90	+1.0
6,833,825	+		Pf6N2E2_6014	0.90	-0.6
6,833,825	+		Pf6N2E2_6014	0.90	+1.0
6,833,825	+		Pf6N2E2_6014	0.90	-0.3
6,833,825	+		Pf6N2E2_6014	0.90	-0.9
6,833,825	+		Pf6N2E2_6014	0.90	+1.0
6,833,826	-				-0.9
6,833,826	-				-0.0
6,833,826	-				-0.0
6,833,826	-				-0.3
6,833,843	-				-2.2
6,833,853	+				-1.0
6,833,868	-				-0.0
6,833,868	-				-0.0
6,833,879	+				-1.1
6,833,880	-				-0.7
6,833,934	+				-0.0
6,833,934	+				-0.0
6,833,934	+				+1.0
6,833,935	-				+1.0
6,834,062	+				-0.6
6,834,062	+				+1.0
6,834,063	-				+1.0