Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5692

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
6,504,585	-				+1.0
6,504,638	+				+1.0
6,504,639	-				+0.0
6,504,678	-				-0.7
6,504,678	-				+1.0
6,504,689	+				+1.0
6,504,690	-				+0.4
6,504,720	+				+1.0
6,504,721	-				+1.0
6,504,721	-				+1.0
6,504,721	-				+0.0
6,504,721	-				+1.0
6,504,721	-				-0.7
6,504,740	+				-1.1
6,504,740	+				+0.0
6,504,740	+				-0.6
6,504,740	+				-0.6
6,504,741	-				-0.7
6,504,741	-				+1.0
6,504,741	-				+1.0
6,504,741	-				+0.0
6,504,741	-				+0.0
6,504,741	-				-1.0
6,504,741	-				+1.0
6,504,817	+		Pf6N2E2_5691	0.10	+0.6
6,504,817	+		Pf6N2E2_5691	0.10	+1.0
6,504,818	-		Pf6N2E2_5691	0.10	+0.5
6,505,314	+		Pf6N2E2_5691	0.75	-1.0
6,505,322	+		Pf6N2E2_5691	0.76	+0.4
6,505,322	+		Pf6N2E2_5691	0.76	-0.0
6,505,322	+		Pf6N2E2_5691	0.76	-0.4
6,505,322	+		Pf6N2E2_5691	0.76	+1.0
6,505,322	+		Pf6N2E2_5691	0.76	+1.0
6,505,323	-		Pf6N2E2_5691	0.76	+0.0
6,505,330	+		Pf6N2E2_5691	0.77	+0.0
6,505,330	+		Pf6N2E2_5691	0.77	+0.4
6,505,330	+		Pf6N2E2_5691	0.77	-2.0
6,505,330	+		Pf6N2E2_5691	0.77	+0.2
6,505,330	+		Pf6N2E2_5691	0.77	+0.0
6,505,366	-		Pf6N2E2_5691	0.82	-0.6
6,505,384	-		Pf6N2E2_5691	0.84	+1.0
6,505,384	-		Pf6N2E2_5691	0.84	-0.1
6,505,559	+				+0.0
6,505,559	+				+0.0
6,505,566	-				+1.0
6,505,569	+				+1.0
6,505,569	+				+0.0
6,505,569	+				-2.6
6,505,569	+				+0.0
6,505,569	+				+1.0
6,505,569	+				+0.0
6,505,570	-				+0.9
6,505,570	-				+1.0
6,505,570	-				+0.0
6,505,593	-				+1.0
6,505,678	+		Pf6N2E2_5692	0.10	+0.0
6,505,678	+		Pf6N2E2_5692	0.10	-1.6
6,505,679	-		Pf6N2E2_5692	0.10	-1.0
6,505,679	-		Pf6N2E2_5692	0.10	+1.0
6,505,679	-				+1.0
6,505,691	+		Pf6N2E2_5692	0.12	+1.0
6,505,691	+		Pf6N2E2_5692	0.12	-0.6
6,505,691	+		Pf6N2E2_5692	0.12	-0.7
6,505,870	+		Pf6N2E2_5692	0.31	+1.0
6,505,870	+		Pf6N2E2_5692	0.31	+1.0
6,505,976	-		Pf6N2E2_5692	0.43	+1.0
6,506,048	+		Pf6N2E2_5692	0.50	-0.8
6,506,048	+		Pf6N2E2_5692	0.50	+0.0
6,506,049	-		Pf6N2E2_5692	0.50	+0.0
6,506,230	+		Pf6N2E2_5692	0.70	-0.6
6,506,321	-		Pf6N2E2_5692	0.80	+0.0
6,506,321	-		Pf6N2E2_5692	0.80	+1.0
6,506,382	+		Pf6N2E2_5692	0.86	-1.0
6,506,382	+		Pf6N2E2_5692	0.86	+0.0
6,506,382	+		Pf6N2E2_5692	0.86	+0.0
6,506,382	+		Pf6N2E2_5692	0.86	-0.6
6,506,382	+		Pf6N2E2_5692	0.86	+0.0
6,506,382	+				+1.0
6,506,382	+		Pf6N2E2_5692	0.86	+1.0
6,506,382	+		Pf6N2E2_5692	0.86	+1.0
6,506,382	+		Pf6N2E2_5692	0.86	-0.5
6,506,383	-		Pf6N2E2_5692	0.86	-1.2
6,506,383	-		Pf6N2E2_5692	0.86	-0.6
6,506,383	-		Pf6N2E2_5692	0.86	+1.0
6,506,383	-		Pf6N2E2_5692	0.86	-1.9
6,506,383	-		Pf6N2E2_5692	0.86	+1.0
6,506,383	-		Pf6N2E2_5692	0.86	-1.0
6,506,383	-		Pf6N2E2_5692	0.86	+1.0
6,506,507	-				+1.0
6,506,507	-				+1.0
6,506,507	-				-2.2
6,506,511	+				-0.3
6,506,563	+				+0.0
6,506,564	-				+1.0
6,506,578	+				+1.0
6,506,651	+				+1.0
6,506,651	+				+0.0
6,506,651	+				-1.6
6,506,651	+				-0.2
6,506,652	-				-1.6
6,506,652	-				-1.2
6,506,652	-				+1.6
6,506,652	-				+1.0
6,506,652	-				+1.0
6,506,674	+		Pf6N2E2_5693	0.11	+1.0
6,506,675	-		Pf6N2E2_5693	0.11	-0.4
6,506,675	-		Pf6N2E2_5693	0.11	-0.6
6,506,726	-		Pf6N2E2_5693	0.18	+1.0
6,506,810	+		Pf6N2E2_5693	0.28	+1.0
6,506,810	+		Pf6N2E2_5693	0.28	+1.0
6,506,810	+		Pf6N2E2_5693	0.28	+0.4
6,506,810	+		Pf6N2E2_5693	0.28	+1.0
6,506,810	+		Pf6N2E2_5693	0.28	-0.8
6,506,811	-		Pf6N2E2_5693	0.28	+0.6
6,506,838	+		Pf6N2E2_5693	0.31	-1.0
6,506,838	+		Pf6N2E2_5693	0.31	+0.0
6,506,839	-		Pf6N2E2_5693	0.32	+1.0
6,506,839	-		Pf6N2E2_5693	0.32	-0.6
6,507,022	+		Pf6N2E2_5693	0.54	-1.0
6,507,041	+		Pf6N2E2_5693	0.56	+0.0
6,507,041	+		Pf6N2E2_5693	0.56	+1.0
6,507,042	-		Pf6N2E2_5693	0.57	-0.7
6,507,092	+		Pf6N2E2_5693	0.63	-1.2
6,507,092	+		Pf6N2E2_5693	0.63	-2.3
6,507,093	-		Pf6N2E2_5693	0.63	-1.2
6,507,182	+		Pf6N2E2_5693	0.74	+1.0
6,507,182	+		Pf6N2E2_5693	0.74	-0.6
6,507,182	+		Pf6N2E2_5693	0.74	+0.0
6,507,182	+		Pf6N2E2_5693	0.74	+1.0
6,507,182	+		Pf6N2E2_5693	0.74	+1.0
6,507,182	+		Pf6N2E2_5693	0.74	+1.0
6,507,182	+		Pf6N2E2_5693	0.74	+1.0
6,507,182	+		Pf6N2E2_5693	0.74	-0.7
6,507,183	-		Pf6N2E2_5693	0.74	-1.8
6,507,183	-		Pf6N2E2_5693	0.74	+0.0
6,507,183	-		Pf6N2E2_5693	0.74	-0.6
6,507,183	-		Pf6N2E2_5693	0.74	-0.7
6,507,183	-		Pf6N2E2_5693	0.74	+1.0
6,507,226	-		Pf6N2E2_5693	0.79	+0.1
6,507,226	-		Pf6N2E2_5693	0.79	-1.2
6,507,226	-		Pf6N2E2_5693	0.79	-0.6
6,507,226	-		Pf6N2E2_5693	0.79	+1.0
6,507,226	-		Pf6N2E2_5693	0.79	+1.0
6,507,226	-		Pf6N2E2_5693	0.79	-1.0
6,507,226	-		Pf6N2E2_5693	0.79	+1.0
6,507,233	+		Pf6N2E2_5693	0.80	+1.0
6,507,233	+		Pf6N2E2_5693	0.80	-1.1
6,507,233	+		Pf6N2E2_5693	0.80	-0.4
6,507,234	-		Pf6N2E2_5693	0.80	-1.0
6,507,347	+				-1.0
6,507,348	-				+0.0
6,507,380	+				-0.6
6,507,380	+				-0.6
6,507,380	+				+1.0
6,507,381	-				+0.0
6,507,381	-				+0.0
6,507,465	+				+0.0
6,507,465	+				-0.6
6,507,466	-				+1.0
6,507,466	-				-0.2