Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5691

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
6,503,793	-		Pf6N2E2_5689	0.13	+0.1
6,503,917	+		Pf6N2E2_5689	0.39	+0.0
6,503,918	-		Pf6N2E2_5689	0.39	+0.6
6,503,918	-		Pf6N2E2_5689	0.39	+1.0
6,504,078	+		Pf6N2E2_5689	0.74	+1.0
6,504,079	-		Pf6N2E2_5689	0.74	+0.0
6,504,142	+		Pf6N2E2_5689	0.87	+0.0
6,504,184	+				-0.4
6,504,184	+				+0.0
6,504,184	+				+0.0
6,504,184	+				+1.0
6,504,219	-				-0.6
6,504,585	-				+1.0
6,504,638	+				+1.0
6,504,639	-				+0.0
6,504,678	-				-0.7
6,504,678	-				+1.0
6,504,689	+				+1.0
6,504,690	-				+0.4
6,504,720	+				+1.0
6,504,721	-				+1.0
6,504,721	-				+1.0
6,504,721	-				+0.0
6,504,721	-				+1.0
6,504,721	-				-0.7
6,504,740	+				-1.1
6,504,740	+				+0.0
6,504,740	+				-0.6
6,504,740	+				-0.6
6,504,741	-				-0.7
6,504,741	-				+1.0
6,504,741	-				+1.0
6,504,741	-				+0.0
6,504,741	-				+0.0
6,504,741	-				-1.0
6,504,741	-				+1.0
6,504,817	+		Pf6N2E2_5691	0.10	+0.6
6,504,817	+		Pf6N2E2_5691	0.10	+1.0
6,504,818	-		Pf6N2E2_5691	0.10	+0.5
6,505,314	+		Pf6N2E2_5691	0.75	-1.0
6,505,322	+		Pf6N2E2_5691	0.76	+0.4
6,505,322	+		Pf6N2E2_5691	0.76	-0.0
6,505,322	+		Pf6N2E2_5691	0.76	-0.4
6,505,322	+		Pf6N2E2_5691	0.76	+1.0
6,505,322	+		Pf6N2E2_5691	0.76	+1.0
6,505,323	-		Pf6N2E2_5691	0.76	+0.0
6,505,330	+		Pf6N2E2_5691	0.77	+0.0
6,505,330	+		Pf6N2E2_5691	0.77	+0.4
6,505,330	+		Pf6N2E2_5691	0.77	-2.0
6,505,330	+		Pf6N2E2_5691	0.77	+0.2
6,505,330	+		Pf6N2E2_5691	0.77	+0.0
6,505,366	-		Pf6N2E2_5691	0.82	-0.6
6,505,384	-		Pf6N2E2_5691	0.84	+1.0
6,505,384	-		Pf6N2E2_5691	0.84	-0.1
6,505,559	+				+0.0
6,505,559	+				+0.0
6,505,566	-				+1.0
6,505,569	+				+1.0
6,505,569	+				+0.0
6,505,569	+				-2.6
6,505,569	+				+0.0
6,505,569	+				+1.0
6,505,569	+				+0.0
6,505,570	-				+0.9
6,505,570	-				+1.0
6,505,570	-				+0.0
6,505,593	-				+1.0
6,505,678	+		Pf6N2E2_5692	0.10	+0.0
6,505,678	+		Pf6N2E2_5692	0.10	-1.6
6,505,679	-		Pf6N2E2_5692	0.10	-1.0
6,505,679	-		Pf6N2E2_5692	0.10	+1.0
6,505,679	-				+1.0
6,505,691	+		Pf6N2E2_5692	0.12	+1.0
6,505,691	+		Pf6N2E2_5692	0.12	-0.6
6,505,691	+		Pf6N2E2_5692	0.12	-0.7
6,505,870	+		Pf6N2E2_5692	0.31	+1.0
6,505,870	+		Pf6N2E2_5692	0.31	+1.0
6,505,976	-		Pf6N2E2_5692	0.43	+1.0
6,506,048	+		Pf6N2E2_5692	0.50	-0.8
6,506,048	+		Pf6N2E2_5692	0.50	+0.0
6,506,049	-		Pf6N2E2_5692	0.50	+0.0
6,506,230	+		Pf6N2E2_5692	0.70	-0.6
6,506,321	-		Pf6N2E2_5692	0.80	+0.0
6,506,321	-		Pf6N2E2_5692	0.80	+1.0
6,506,382	+		Pf6N2E2_5692	0.86	-1.0
6,506,382	+		Pf6N2E2_5692	0.86	+0.0
6,506,382	+		Pf6N2E2_5692	0.86	+0.0
6,506,382	+		Pf6N2E2_5692	0.86	-0.6
6,506,382	+		Pf6N2E2_5692	0.86	+0.0
6,506,382	+				+1.0
6,506,382	+		Pf6N2E2_5692	0.86	+1.0
6,506,382	+		Pf6N2E2_5692	0.86	+1.0
6,506,382	+		Pf6N2E2_5692	0.86	-0.5
6,506,383	-		Pf6N2E2_5692	0.86	-1.2
6,506,383	-		Pf6N2E2_5692	0.86	-0.6
6,506,383	-		Pf6N2E2_5692	0.86	+1.0
6,506,383	-		Pf6N2E2_5692	0.86	-1.9
6,506,383	-		Pf6N2E2_5692	0.86	+1.0
6,506,383	-		Pf6N2E2_5692	0.86	-1.0
6,506,383	-		Pf6N2E2_5692	0.86	+1.0