Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3573

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
4,162,540	+		Pf6N2E2_3571	0.63	-1.0
4,162,540	+		Pf6N2E2_3571	0.63	+1.1
4,162,541	-		Pf6N2E2_3571	0.63	+1.1
4,162,541	-		Pf6N2E2_3571	0.63	+1.1
4,162,767	+				+0.1
4,162,767	+				+1.1
4,162,767	+				-2.6
4,162,788	+				+0.1
4,162,789	-				+0.9
4,162,805	+				+1.1
4,162,805	+				-1.3
4,162,805	+				-0.5
4,162,805	+				+1.1
4,162,806	-				+0.1
4,162,806	-				+1.1
4,162,806	-				+1.1
4,162,806	-				+0.1
4,162,840	+				+0.1
4,162,840	+				-0.7
4,162,841	-				-1.1
4,162,885	+		Pf6N2E2_3572	0.14	-2.2
4,162,886	-		Pf6N2E2_3572	0.14	-0.9
4,162,897	-		Pf6N2E2_3572	0.16	+1.1
4,162,897	-				+1.1
4,162,897	-		Pf6N2E2_3572	0.16	-0.8
4,162,926	+		Pf6N2E2_3572	0.20	+2.1
4,162,926	+		Pf6N2E2_3572	0.20	-0.6
4,162,926	+		Pf6N2E2_3572	0.20	-0.7
4,162,926	+		Pf6N2E2_3572	0.20	-0.9
4,162,926	+		Pf6N2E2_3572	0.20	-0.9
4,162,926	+		Pf6N2E2_3572	0.20	+0.1
4,162,927	-		Pf6N2E2_3572	0.21	-0.5
4,162,927	-		Pf6N2E2_3572	0.21	-0.9
4,162,927	-		Pf6N2E2_3572	0.21	+0.1
4,162,927	-		Pf6N2E2_3572	0.21	-0.5
4,162,927	-		Pf6N2E2_3572	0.21	-0.8
4,162,927	-		Pf6N2E2_3572	0.21	+1.1
4,163,163	+		Pf6N2E2_3572	0.59	+0.1
4,163,163	+		Pf6N2E2_3572	0.59	+0.1
4,163,163	+		Pf6N2E2_3572	0.59	+0.1
4,163,163	+		Pf6N2E2_3572	0.59	+1.1
4,163,163	+		Pf6N2E2_3572	0.59	+0.7
4,163,163	+		Pf6N2E2_3572	0.59	+1.1
4,163,163	+		Pf6N2E2_3572	0.59	+1.1
4,163,164	-		Pf6N2E2_3572	0.59	+1.1
4,163,164	-		Pf6N2E2_3572	0.59	+1.1
4,163,164	-		Pf6N2E2_3572	0.59	+1.1
4,163,164	-		Pf6N2E2_3572	0.59	-0.3
4,163,164	-		Pf6N2E2_3572	0.59	+0.1
4,163,164	-		Pf6N2E2_3572	0.59	+0.1
4,163,164	-		Pf6N2E2_3572	0.59	+1.1
4,163,164	-		Pf6N2E2_3572	0.59	+1.3
4,163,164	-		Pf6N2E2_3572	0.59	-0.5
4,163,164	-		Pf6N2E2_3572	0.59	+0.1
4,163,164	-		Pf6N2E2_3572	0.59	-0.5
4,163,164	-		Pf6N2E2_3572	0.59	+1.1
4,163,164	-		Pf6N2E2_3572	0.59	-0.9
4,163,164	-		Pf6N2E2_3572	0.59	-1.2
4,163,164	-		Pf6N2E2_3572	0.59	-0.5
4,163,164	-		Pf6N2E2_3572	0.59	-0.1
4,163,164	-		Pf6N2E2_3572	0.59	+0.1
4,163,164	-		Pf6N2E2_3572	0.59	+1.1
4,163,246	+		Pf6N2E2_3572	0.73	-0.7
4,163,247	-		Pf6N2E2_3572	0.73	-3.5
4,163,333	-		Pf6N2E2_3572	0.87	-0.9
4,163,441	+				-0.8
4,163,658	+		Pf6N2E2_3573	0.37	-0.5
4,163,659	-		Pf6N2E2_3573	0.37	-0.5
4,163,659	-		Pf6N2E2_3573	0.37	-0.5
4,163,659	-		Pf6N2E2_3573	0.37	+1.1
4,163,872	+		Pf6N2E2_3573	0.74	+1.1
4,164,089	+				+1.1
4,164,089	+				-1.3
4,164,089	+				+0.1
4,164,090	-				-0.5
4,164,090	-				-1.0
4,164,090	-				-0.3
4,164,090	-				+1.1
4,164,160	+				+1.1
4,164,161	-				-1.7
4,164,161	-				+1.1
4,164,161	-				-0.6
4,164,161	-				-0.5
4,164,410	+		Pf6N2E2_3574	0.18	+0.1
4,164,410	+		Pf6N2E2_3574	0.18	+0.1
4,164,410	+		Pf6N2E2_3574	0.18	-0.9
4,164,410	+		Pf6N2E2_3574	0.18	+1.1
4,164,410	+		Pf6N2E2_3574	0.18	+1.1
4,164,410	+		Pf6N2E2_3574	0.18	+1.1
4,164,410	+		Pf6N2E2_3574	0.18	-0.7
4,164,410	+		Pf6N2E2_3574	0.18	-0.9
4,164,410	+		Pf6N2E2_3574	0.18	-0.9
4,164,410	+		Pf6N2E2_3574	0.18	-0.6
4,164,410	+		Pf6N2E2_3574	0.18	-1.5
4,164,410	+		Pf6N2E2_3574	0.18	-0.7
4,164,410	+		Pf6N2E2_3574	0.18	-0.5
4,164,410	+		Pf6N2E2_3574	0.18	+0.1
4,164,410	+		Pf6N2E2_3574	0.18	+1.1
4,164,410	+		Pf6N2E2_3574	0.18	-0.3
4,164,410	+		Pf6N2E2_3574	0.18	+1.1
4,164,410	+		Pf6N2E2_3574	0.18	-0.9
4,164,410	+		Pf6N2E2_3574	0.18	-0.4
4,164,411	-		Pf6N2E2_3574	0.18	-0.9
4,164,411	-		Pf6N2E2_3574	0.18	+1.1
4,164,411	-		Pf6N2E2_3574	0.18	-0.5
4,164,411	-		Pf6N2E2_3574	0.18	-0.5
4,164,411	-		Pf6N2E2_3574	0.18	-0.5
4,164,411	-		Pf6N2E2_3574	0.18	-0.7
4,164,411	-		Pf6N2E2_3574	0.18	+1.1
4,164,411	-		Pf6N2E2_3574	0.18	+0.1
4,164,411	-		Pf6N2E2_3574	0.18	+0.1
4,164,411	-		Pf6N2E2_3574	0.18	-0.5
4,164,411	-		Pf6N2E2_3574	0.18	-0.5
4,164,411	-		Pf6N2E2_3574	0.18	+0.1
4,164,411	-		Pf6N2E2_3574	0.18	-0.9
4,164,411	-		Pf6N2E2_3574	0.18	-1.7
4,164,411	-		Pf6N2E2_3574	0.18	+1.1
4,164,411	-		Pf6N2E2_3574	0.18	+1.1
4,164,411	-		Pf6N2E2_3574	0.18	-0.8
4,164,411	-		Pf6N2E2_3574	0.18	-0.4
4,164,521	+		Pf6N2E2_3574	0.28	+0.1
4,164,521	+		Pf6N2E2_3574	0.28	+0.3
4,164,521	+		Pf6N2E2_3574	0.28	+1.1
4,164,522	-		Pf6N2E2_3574	0.28	+1.1
4,164,569	+		Pf6N2E2_3574	0.32	+1.1
4,164,569	+		Pf6N2E2_3574	0.32	-1.5
4,164,570	-		Pf6N2E2_3574	0.32	+1.1
4,164,570	-		Pf6N2E2_3574	0.32	-0.7
4,164,570	-		Pf6N2E2_3574	0.32	-1.5
4,164,570	-		Pf6N2E2_3574	0.32	+0.1
4,164,570	-		Pf6N2E2_3574	0.32	+1.1
4,164,583	+		Pf6N2E2_3574	0.34	-0.8
4,164,698	+		Pf6N2E2_3574	0.44	-0.5
4,164,699	-		Pf6N2E2_3574	0.44	-0.5
4,164,712	-		Pf6N2E2_3574	0.45	-0.5
4,164,913	+		Pf6N2E2_3574	0.63	+1.1
4,164,947	+		Pf6N2E2_3574	0.66	+0.1
4,164,948	-		Pf6N2E2_3574	0.66	+0.1