Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3473

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
4,053,003	-				+2.1
4,053,003	-				-1.5
4,053,485	+		Pf6N2E2_3472	0.65	+1.1
4,053,485	+		Pf6N2E2_3472	0.65	-1.8
4,053,485	+		Pf6N2E2_3472	0.65	+1.1
4,053,485	+		Pf6N2E2_3472	0.65	+1.1
4,053,485	+		Pf6N2E2_3472	0.65	+1.1
4,053,485	+		Pf6N2E2_3472	0.65	+1.1
4,053,486	-		Pf6N2E2_3472	0.65	+0.1
4,053,698	+				+0.1
4,053,698	+				-1.3
4,053,698	+				+1.1
4,053,698	+				+0.1
4,053,699	-				+0.1
4,053,699	-				+1.1
4,053,771	+				+1.1
4,053,771	+				+1.1
4,053,771	+				-0.5
4,053,771	+				-0.5
4,053,771	+				+0.1
4,053,772	-				-1.5
4,053,772	-				+0.1
4,053,772	-				+1.1
4,053,797	+				-0.2
4,053,797	+				-2.5
4,053,797	+				+0.1
4,053,871	-				+1.1
4,053,986	+				+0.1
4,053,987	-				+1.1
4,054,179	+		Pf6N2E2_3473	0.15	-0.6
4,054,179	+		Pf6N2E2_3473	0.15	-1.1
4,054,180	-		Pf6N2E2_3473	0.15	+0.1
4,054,180	-		Pf6N2E2_3473	0.15	-0.5
4,054,353	+		Pf6N2E2_3473	0.28	-1.6
4,054,353	+		Pf6N2E2_3473	0.28	-2.0
4,054,353	+		Pf6N2E2_3473	0.28	-1.9
4,054,354	-		Pf6N2E2_3473	0.28	+1.1
4,054,354	-		Pf6N2E2_3473	0.28	+0.1
4,054,354	-		Pf6N2E2_3473	0.28	+1.1
4,054,354	-		Pf6N2E2_3473	0.28	+1.1
4,054,542	+		Pf6N2E2_3473	0.42	-0.5
4,054,542	+		Pf6N2E2_3473	0.42	-0.5
4,054,542	+		Pf6N2E2_3473	0.42	+1.1
4,054,543	-		Pf6N2E2_3473	0.42	-0.1
4,054,543	-		Pf6N2E2_3473	0.42	+0.1
4,054,737	+		Pf6N2E2_3473	0.56	-1.5
4,054,737	+		Pf6N2E2_3473	0.56	-1.6
4,054,737	+		Pf6N2E2_3473	0.56	+1.1
4,054,737	+		Pf6N2E2_3473	0.56	+0.1
4,054,992	+		Pf6N2E2_3473	0.75	+0.1
4,054,992	+		Pf6N2E2_3473	0.75	-0.5
4,054,992	+		Pf6N2E2_3473	0.75	+0.1
4,054,992	+		Pf6N2E2_3473	0.75	+0.2
4,054,992	+		Pf6N2E2_3473	0.75	-0.5
4,054,993	-		Pf6N2E2_3473	0.75	-2.4
4,054,993	-		Pf6N2E2_3473	0.75	-1.5
4,054,993	-		Pf6N2E2_3473	0.75	+1.1
4,054,993	-		Pf6N2E2_3473	0.75	+0.1
4,054,993	-		Pf6N2E2_3473	0.75	-0.5
4,055,357	-				+0.1
4,055,357	-				+1.1
4,055,357	-				-0.5
4,055,357	-				+0.1
4,055,357	-				+0.3
4,055,357	-				+1.1
4,055,359	+				-0.8
4,055,359	+				-1.7
4,055,360	-				+0.1
4,055,371	-				-0.3
4,055,576	+				+1.1
4,055,576	+				+0.1
4,055,576	+				-1.3
4,055,576	+				+1.1
4,055,576	+				-0.5
4,055,577	-				-1.5
4,055,577	-				-0.8
4,055,577	-				+1.1
4,055,745	+		Pf6N2E2_3474	0.16	+0.1
4,055,747	+		Pf6N2E2_3474	0.16	-0.3
4,055,747	+		Pf6N2E2_3474	0.16	+1.1
4,055,747	+		Pf6N2E2_3474	0.16	-0.5
4,055,748	-		Pf6N2E2_3474	0.16	-1.6
4,056,080	+		Pf6N2E2_3474	0.46	+0.2
4,056,080	+		Pf6N2E2_3474	0.46	+0.1
4,056,087	-		Pf6N2E2_3474	0.47	-0.6
4,056,087	-		Pf6N2E2_3474	0.47	-0.5
4,056,087	-		Pf6N2E2_3474	0.47	-0.5
4,056,087	-		Pf6N2E2_3474	0.47	-1.1
4,056,087	-		Pf6N2E2_3474	0.47	+0.1
4,056,099	-		Pf6N2E2_3474	0.48	+1.1
4,056,099	-		Pf6N2E2_3474	0.48	-0.9
4,056,138	-		Pf6N2E2_3474	0.52	+0.1
4,056,138	-		Pf6N2E2_3474	0.52	-0.9
4,056,162	+		Pf6N2E2_3474	0.54	+1.1
4,056,163	-		Pf6N2E2_3474	0.54	+1.1
4,056,174	-		Pf6N2E2_3474	0.55	+1.1
4,056,251	+		Pf6N2E2_3474	0.62	+1.1
4,056,251	+		Pf6N2E2_3474	0.62	+1.1
4,056,276	-		Pf6N2E2_3474	0.64	-0.5
4,056,276	-		Pf6N2E2_3474	0.64	+1.1
4,056,276	-		Pf6N2E2_3474	0.64	+1.1