Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3107

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
3,594,487	+				+0.0
3,594,638	+				-1.0
3,594,639	-				+1.0
3,594,661	+				-0.6
3,594,662	-				+1.0
3,594,662	-				+1.0
3,594,694	-				+1.0
3,594,748	+				+1.0
3,594,749	-				+1.0
3,594,763	-				+1.0
3,594,763	-				-0.3
3,594,903	+				+1.0
3,595,001	+				+0.0
3,595,009	-				+1.0
3,595,166	-				+0.0
3,595,166	-				-1.1
3,595,271	+				+0.0
3,595,488	-		Pf6N2E2_3107	0.14	+1.0
3,595,621	-		Pf6N2E2_3107	0.22	+0.0
3,595,700	-		Pf6N2E2_3107	0.26	-1.2
3,595,759	-		Pf6N2E2_3107	0.30	-0.6
3,595,946	-		Pf6N2E2_3107	0.41	-2.0
3,596,273	-		Pf6N2E2_3107	0.61	+1.0
3,596,342	-		Pf6N2E2_3107	0.65	+1.0
3,596,434	+		Pf6N2E2_3107	0.71	-3.2
3,596,446	+		Pf6N2E2_3107	0.71	-0.6
3,596,541	+		Pf6N2E2_3107	0.77	+0.0
3,596,542	-		Pf6N2E2_3107	0.77	+0.0
3,596,610	-		Pf6N2E2_3107	0.81	-0.6
3,596,639	-		Pf6N2E2_3107	0.83	+1.0
3,596,686	-		Pf6N2E2_3107	0.86	-0.6
3,596,722	+		Pf6N2E2_3107	0.88	+1.0
3,596,723	-		Pf6N2E2_3107	0.88	+1.0
3,596,723	-		Pf6N2E2_3107	0.88	+0.0
3,596,723	-		Pf6N2E2_3107	0.88	+1.0
3,596,723	-		Pf6N2E2_3107	0.88	+0.0
3,596,924	+				-1.0
3,596,925	-				+1.0
3,597,047	-				-2.8
3,597,047	-				+1.0
3,597,067	-				-0.6
3,597,092	+				-2.3
3,597,093	-				-0.2
3,597,093	-				+1.0
3,597,113	+				+1.0
3,597,113	+				-1.3
3,597,113	+				-0.6
3,597,113	+				-1.0
3,597,113	+				-0.6
3,597,113	+				-0.6
3,597,114	-				+1.0
3,597,114	-				-0.6
3,597,114	-				-0.6
3,597,114	-				-0.6
3,597,306	+				+0.0
3,597,306	+				+1.0
3,597,370	-				-1.0
3,597,370	-				-0.5
3,597,375	+				-1.3
3,597,376	-				+1.0
3,597,391	+				+1.0
3,597,392	-				-2.8
3,597,392	-				+1.0
3,597,395	+				+0.0
3,597,396	-				-1.3
3,597,396	-				+1.0
3,597,396	-				+1.0
3,597,493	+				+1.0
3,597,493	+				+1.0
3,597,493	+				+1.0
3,597,494	-				+0.3
3,597,494	-				-0.1
3,597,500	-				+0.0
3,597,500	-				+1.0
3,597,614	+		Pf6N2E2_3108	0.33	+1.0
3,597,741	-		Pf6N2E2_3108	0.63	+1.0
3,597,741	-		Pf6N2E2_3108	0.63	+0.8
3,597,741	-		Pf6N2E2_3108	0.63	+1.0
3,597,891	-				-0.6
3,597,911	+				+1.0
3,597,911	+				+0.0
3,597,911	+				-0.6
3,597,911	+				+1.0
3,597,911	+				+1.0
3,597,911	+				-0.6
3,597,912	-				+0.0
3,597,912	-				+1.0
3,597,912	-				-1.0
3,597,912	-				+0.0
3,597,912	-				+0.0