Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2897

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
3,385,432	+		Pf6N2E2_2896	0.57	-1.0
3,385,432	+		Pf6N2E2_2896	0.57	+1.0
3,385,432	+		Pf6N2E2_2896	0.57	-1.2
3,385,432	+		Pf6N2E2_2896	0.57	+1.0
3,385,433	-		Pf6N2E2_2896	0.57	+1.0
3,385,545	+		Pf6N2E2_2896	0.73	-1.0
3,385,545	+		Pf6N2E2_2896	0.73	+0.0
3,385,675	+				-0.6
3,385,675	+				-1.6
3,385,675	+				-0.8
3,385,675	+				+1.0
3,385,675	+				+1.0
3,385,675	+				-1.5
3,385,675	+				-2.0
3,385,676	-				+1.0
3,385,676	-				-0.2
3,385,779	+				-0.5
3,385,780	-				-0.4
3,385,799	+				+1.0
3,385,800	-				+1.0
3,385,800	-				+1.0
3,385,810	+				+0.0
3,385,811	-				+0.0
3,385,913	-				-0.6
3,385,913	-				-0.6
3,385,913	-				-0.6
3,385,922	-				-0.6
3,386,022	-				+1.0
3,386,114	+		Pf6N2E2_2897	0.19	+0.0
3,386,114	+		Pf6N2E2_2897	0.19	-1.6
3,386,114	+		Pf6N2E2_2897	0.19	-2.0
3,386,114	+		Pf6N2E2_2897	0.19	-1.2
3,386,114	+		Pf6N2E2_2897	0.19	+1.0
3,386,114	+		Pf6N2E2_2897	0.19	-0.6
3,386,115	-		Pf6N2E2_2897	0.19	+1.0
3,386,115	-		Pf6N2E2_2897	0.19	+1.0
3,386,115	-		Pf6N2E2_2897	0.19	-2.8
3,386,115	-		Pf6N2E2_2897	0.19	-2.7
3,386,354	+		Pf6N2E2_2897	0.44	+0.0
3,386,354	+		Pf6N2E2_2897	0.44	+1.0
3,386,354	+		Pf6N2E2_2897	0.44	-0.4
3,386,354	+		Pf6N2E2_2897	0.44	+0.0
3,386,354	+		Pf6N2E2_2897	0.44	-1.2
3,386,354	+		Pf6N2E2_2897	0.44	+1.0
3,386,355	-		Pf6N2E2_2897	0.44	+0.0
3,386,355	-		Pf6N2E2_2897	0.44	+0.0
3,386,463	+		Pf6N2E2_2897	0.56	-2.0
3,386,463	+		Pf6N2E2_2897	0.56	+0.0
3,386,464	-		Pf6N2E2_2897	0.56	+1.0
3,386,464	-		Pf6N2E2_2897	0.56	+1.0
3,386,464	-		Pf6N2E2_2897	0.56	+1.0
3,386,464	-		Pf6N2E2_2897	0.56	+1.0
3,386,464	-		Pf6N2E2_2897	0.56	+1.0
3,386,533	+		Pf6N2E2_2897	0.63	+0.0
3,386,533	+		Pf6N2E2_2897	0.63	+1.0
3,386,667	+		Pf6N2E2_2897	0.77	+1.0
3,386,756	+		Pf6N2E2_2897	0.86	-2.5
3,386,757	-		Pf6N2E2_2897	0.86	-1.6
3,386,786	+		Pf6N2E2_2897	0.89	+1.0
3,386,787	-		Pf6N2E2_2897	0.89	+0.0
3,386,892	-				+1.0
3,386,892	-				-0.3
3,386,892	-				-2.3
3,386,892	-				-3.2