Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2449

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,899,467	-				+0.2
2,899,467	-				-0.0
2,899,467	-				-0.0
2,899,632	-		Pf6N2E2_2448	0.28	+1.0
2,899,632	-		Pf6N2E2_2448	0.28	-0.0
2,899,632	-		Pf6N2E2_2448	0.28	+1.0
2,899,740	-		Pf6N2E2_2448	0.45	+1.0
2,899,740	-		Pf6N2E2_2448	0.45	-0.0
2,899,740	-		Pf6N2E2_2448	0.45	-0.6
2,900,222	+				-1.4
2,900,222	+				+1.0
2,900,222	+				+1.0
2,900,222	+				-0.0
2,900,223	-				-0.0
2,900,223	-				+1.0
2,900,418	+		Pf6N2E2_2449	0.28	+1.0
2,900,418	+		Pf6N2E2_2449	0.28	+1.0
2,900,418	+		Pf6N2E2_2449	0.28	-1.0
2,900,419	-		Pf6N2E2_2449	0.28	-0.6
2,900,419	-		Pf6N2E2_2449	0.28	-0.0
2,900,419	-		Pf6N2E2_2449	0.28	+1.0
2,900,419	-		Pf6N2E2_2449	0.28	-1.0
2,900,559	+		Pf6N2E2_2449	0.46	+1.0
2,900,559	+		Pf6N2E2_2449	0.46	+1.0
2,900,559	+		Pf6N2E2_2449	0.46	-0.9
2,900,560	-		Pf6N2E2_2449	0.46	-0.0
2,900,560	-		Pf6N2E2_2449	0.46	-0.0
2,900,880	+		Pf6N2E2_2449	0.88	-2.7
2,900,954	+				-0.0
2,900,955	-				-0.6
2,900,955	-				+0.4
2,900,955	-				-0.0
2,900,955	-				-0.0
2,900,958	+				+1.0
2,900,958	+				-0.0
2,901,063	+				-0.0
2,901,064	-				+1.0