Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2445

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
2,895,084	-		Pf6N2E2_2443	0.54	+1.0
2,895,166	-		Pf6N2E2_2443	0.72	+1.0
2,895,207	+		Pf6N2E2_2443	0.81	-0.0
2,895,208	-		Pf6N2E2_2443	0.81	-0.3
2,895,208	-		Pf6N2E2_2443	0.81	-0.0
2,895,237	+		Pf6N2E2_2443	0.87	-2.6
2,895,237	+		Pf6N2E2_2443	0.87	-1.4
2,895,237	+		Pf6N2E2_2443	0.87	+1.0
2,895,238	-		Pf6N2E2_2443	0.87	+1.0
2,895,444	+		Pf6N2E2_2444	0.31	+1.0
2,895,445	-		Pf6N2E2_2444	0.31	+1.0
2,895,445	-		Pf6N2E2_2444	0.31	+1.0
2,895,445	-		Pf6N2E2_2444	0.31	+1.0
2,895,621	-				-0.6
2,895,621	-		Pf6N2E2_2444	0.68	+1.0
2,895,650	+		Pf6N2E2_2444	0.74	+1.0
2,895,650	+		Pf6N2E2_2444	0.74	-0.6
2,895,651	-		Pf6N2E2_2444	0.74	+0.2
2,895,797	+				-0.5
2,895,924	+				+1.0
2,896,214	+		Pf6N2E2_2445	0.46	-0.0
2,896,292	+		Pf6N2E2_2445	0.66	-0.0
2,896,292	+		Pf6N2E2_2445	0.66	-0.9
2,896,319	+		Pf6N2E2_2445	0.73	+1.0
2,896,319	+		Pf6N2E2_2445	0.73	-2.0
2,896,319	+		Pf6N2E2_2445	0.73	-0.0
2,896,319	+		Pf6N2E2_2445	0.73	-0.0
2,896,319	+		Pf6N2E2_2445	0.73	+1.0
2,896,320	-		Pf6N2E2_2445	0.73	-0.0
2,896,320	-		Pf6N2E2_2445	0.73	-1.7
2,896,320	-		Pf6N2E2_2445	0.73	-1.7
2,896,320	-		Pf6N2E2_2445	0.73	+1.0
2,896,320	-		Pf6N2E2_2445	0.73	-0.0
2,896,320	-		Pf6N2E2_2445	0.73	-0.0
2,896,320	-		Pf6N2E2_2445	0.73	-0.0
2,896,323	+		Pf6N2E2_2445	0.74	+1.0
2,896,367	+		Pf6N2E2_2445	0.85	+1.0
2,896,367	+		Pf6N2E2_2445	0.85	+1.0
2,896,368	-		Pf6N2E2_2445	0.85	-0.6
2,896,368	-		Pf6N2E2_2445	0.85	+1.0
2,896,368	-		Pf6N2E2_2445	0.85	+1.0
2,896,368	-				-1.0
2,896,368	-		Pf6N2E2_2445	0.85	-0.0
2,896,431	+				-0.0
2,896,487	+				+1.0
2,896,487	+				+1.0
2,896,487	+				-0.0
2,896,488	-				-0.0
2,896,488	-				+1.0
2,896,488	-				+1.0
2,896,488	-				-0.0
2,896,488	-				-1.6
2,896,488	-				-1.0
2,896,488	-				-0.0
2,896,488	-				-0.0
2,896,555	+				-0.0
2,896,555	+				+1.0
2,896,555	+				-0.0
2,896,556	-				-1.5
2,896,556	-				+1.0
2,896,556	-				-1.5
2,896,557	+				-0.6
2,896,557	+				-0.9
2,896,595	+				+1.0
2,896,607	+				-0.0
2,896,608	-				-0.4
2,896,608	-				+0.2
2,896,608	-				-1.1
2,896,608	-				-0.7
2,896,608	-				+1.0
2,896,686	-				-0.6
2,896,686	-				+1.0
2,896,845	-		Pf6N2E2_2446	0.16	-0.0
2,896,892	+		Pf6N2E2_2446	0.20	-0.0
2,896,892	+		Pf6N2E2_2446	0.20	-1.2
2,896,893	-		Pf6N2E2_2446	0.20	+1.0
2,896,893	-		Pf6N2E2_2446	0.20	+1.0
2,896,895	+		Pf6N2E2_2446	0.21	-1.6
2,896,937	+		Pf6N2E2_2446	0.24	-0.0
2,896,937	+		Pf6N2E2_2446	0.24	-0.0
2,896,937	+		Pf6N2E2_2446	0.24	-0.0
2,896,937	+		Pf6N2E2_2446	0.24	-3.4
2,896,937	+		Pf6N2E2_2446	0.24	-1.0
2,896,937	+		Pf6N2E2_2446	0.24	-1.0
2,896,937	+		Pf6N2E2_2446	0.24	+1.0
2,896,937	+		Pf6N2E2_2446	0.24	+1.0
2,896,937	+		Pf6N2E2_2446	0.24	-0.4
2,896,937	+		Pf6N2E2_2446	0.24	-1.1
2,896,938	-		Pf6N2E2_2446	0.24	+1.0
2,896,938	-		Pf6N2E2_2446	0.24	-0.0
2,896,938	-		Pf6N2E2_2446	0.24	-0.6
2,896,938	-		Pf6N2E2_2446	0.24	-0.5
2,896,938	-		Pf6N2E2_2446	0.24	-0.6
2,896,938	-		Pf6N2E2_2446	0.24	+1.0
2,896,938	-		Pf6N2E2_2446	0.24	+1.0
2,897,078	+		Pf6N2E2_2446	0.36	+1.0
2,897,078	+		Pf6N2E2_2446	0.36	-0.0
2,897,078	+		Pf6N2E2_2446	0.36	+1.0
2,897,078	+		Pf6N2E2_2446	0.36	+1.0
2,897,078	+		Pf6N2E2_2446	0.36	-0.0
2,897,079	-		Pf6N2E2_2446	0.36	-2.1
2,897,079	-		Pf6N2E2_2446	0.36	-0.0
2,897,079	-		Pf6N2E2_2446	0.36	-0.9
2,897,079	-		Pf6N2E2_2446	0.36	+1.0
2,897,195	+		Pf6N2E2_2446	0.45	-1.3
2,897,195	+		Pf6N2E2_2446	0.45	-1.1
2,897,196	-		Pf6N2E2_2446	0.45	+1.0
2,897,270	+		Pf6N2E2_2446	0.51	+1.0
2,897,271	-		Pf6N2E2_2446	0.52	+1.0
2,897,271	-		Pf6N2E2_2446	0.52	+1.0
2,897,271	-		Pf6N2E2_2446	0.52	+1.0
2,897,401	+		Pf6N2E2_2446	0.62	-0.0
2,897,401	+		Pf6N2E2_2446	0.62	+1.0
2,897,401	+		Pf6N2E2_2446	0.62	+1.0
2,897,401	+		Pf6N2E2_2446	0.62	+1.0
2,897,401	+		Pf6N2E2_2446	0.62	-0.0