Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1375

Experiment: Ying_sugar7 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 1
1,611,502	+		Pf6N2E2_1373	0.79	+0.9
1,611,502	+		Pf6N2E2_1373	0.79	-0.9
1,611,502	+		Pf6N2E2_1373	0.79	-0.1
1,611,503	-		Pf6N2E2_1373	0.79	-0.1
1,611,706	+				-0.9
1,611,707	-				+0.9
1,611,904	+				+0.9
1,611,904	+				+0.9
1,611,905	-				-0.7
1,611,905	-				-0.1
1,611,920	-				-0.7
1,611,920	-				-0.7
1,612,070	+				-0.9
1,612,071	-				+0.9
1,612,071	-				-0.1
1,612,202	+				-0.1
1,612,202	+				+0.9
1,612,205	+				+0.9
1,612,205	+				+0.9
1,612,205	+				+0.9
1,612,205	+				+0.9
1,612,206	-				-0.7
1,612,206	-				+0.9
1,612,206	-				-1.1
1,612,209	+				-1.1
1,612,210	-				-1.1
1,612,307	+				+0.9
1,612,308	-				+0.9
1,612,541	+		Pf6N2E2_1375	0.40	-1.3
1,612,688	+		Pf6N2E2_1375	0.59	-0.4
1,612,955	+				+0.9
1,612,956	-				+0.9
1,612,973	+				+0.9
1,612,973	+				+0.9
1,612,973	+				+0.3
1,612,973	+				-0.1
1,612,973	+				+0.9
1,612,973	+				-0.1
1,612,973	+				+0.9
1,612,973	+				+0.9
1,612,974	-				-1.2
1,612,974	-				+0.9
1,613,007	-				+0.9
1,613,019	+				+0.1
1,613,071	+				-0.1
1,613,136	+				+0.9
1,613,197	+				-1.5
1,613,197	+				-1.6
1,613,252	+				-0.1
1,613,252	+				+0.9
1,613,531	+		Pf6N2E2_1376	0.39	+0.9
1,613,531	+		Pf6N2E2_1376	0.39	+0.9
1,613,532	-		Pf6N2E2_1376	0.39	-2.8
1,613,532	-		Pf6N2E2_1376	0.39	+0.9
1,613,535	-		Pf6N2E2_1376	0.39	-0.1
1,613,535	-		Pf6N2E2_1376	0.39	-0.7
1,613,590	-		Pf6N2E2_1376	0.46	+0.6
1,613,854	+		Pf6N2E2_1376	0.77	+0.9