Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5767

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
6,581,315	+		Pf6N2E2_5765	0.77	+1.0
6,581,315	+		Pf6N2E2_5765	0.77	-0.0
6,581,315	+		Pf6N2E2_5765	0.77	-0.6
6,581,316	-		Pf6N2E2_5765	0.77	+1.0
6,581,316	-		Pf6N2E2_5765	0.77	-0.8
6,581,316	-		Pf6N2E2_5765	0.77	-0.5
6,581,316	-		Pf6N2E2_5765	0.77	-0.9
6,581,318	+		Pf6N2E2_5765	0.78	+1.0
6,581,319	-		Pf6N2E2_5765	0.78	+1.0
6,581,319	-		Pf6N2E2_5765	0.78	-0.0
6,581,319	-		Pf6N2E2_5765	0.78	-0.7
6,581,319	-		Pf6N2E2_5765	0.78	+1.0
6,581,327	+		Pf6N2E2_5765	0.78	+1.0
6,581,328	-		Pf6N2E2_5765	0.78	+1.0
6,581,328	-		Pf6N2E2_5765	0.78	+1.0
6,581,328	-		Pf6N2E2_5765	0.78	-0.0
6,581,328	-		Pf6N2E2_5765	0.78	-0.0
6,581,404	+		Pf6N2E2_5765	0.82	+1.0
6,581,404	+		Pf6N2E2_5765	0.82	+1.0
6,581,404	+		Pf6N2E2_5765	0.82	-0.0
6,581,404	+		Pf6N2E2_5765	0.82	+1.0
6,581,404	+		Pf6N2E2_5765	0.82	-0.0
6,581,404	+		Pf6N2E2_5765	0.82	+1.0
6,581,404	+		Pf6N2E2_5765	0.82	-0.9
6,581,405	-		Pf6N2E2_5765	0.82	-0.8
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	+0.2
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	-1.4
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	+1.0
6,581,405	-		Pf6N2E2_5765	0.82	-0.0
6,581,408	+		Pf6N2E2_5765	0.82	-0.6
6,581,409	-		Pf6N2E2_5765	0.82	+1.0
6,581,439	-		Pf6N2E2_5765	0.84	-1.0
6,581,439	-		Pf6N2E2_5765	0.84	-1.0
6,581,735	+				+1.0
6,581,775	+				+1.0
6,581,776	-				-0.0
6,581,776	-				+1.0
6,581,776	-				+1.0
6,581,776	-				+0.1
6,582,030	-		Pf6N2E2_5766	0.80	-0.0
6,582,141	+				+1.0
6,582,236	+				-0.7
6,582,237	-				-0.0
6,582,237	-				+1.0
6,582,274	-				-1.0
6,582,415	+		Pf6N2E2_5767	0.21	+1.0
6,582,416	-		Pf6N2E2_5767	0.21	-0.9
6,582,416	-		Pf6N2E2_5767	0.21	-0.6
6,582,416	-		Pf6N2E2_5767	0.21	-0.6
6,582,416	-		Pf6N2E2_5767	0.21	-0.0
6,582,416	-		Pf6N2E2_5767	0.21	+1.0
6,582,456	+		Pf6N2E2_5767	0.25	-0.6
6,582,457	-		Pf6N2E2_5767	0.25	-0.6
6,582,596	+		Pf6N2E2_5767	0.40	-1.0
6,582,597	-		Pf6N2E2_5767	0.40	+1.0
6,582,597	-		Pf6N2E2_5767	0.40	+1.0
6,582,597	-		Pf6N2E2_5767	0.40	-1.2
6,582,597	-		Pf6N2E2_5767	0.40	-1.0
6,582,597	-		Pf6N2E2_5767	0.40	-2.0
6,582,659	-		Pf6N2E2_5767	0.46	-0.6
6,583,138	+				-0.9
6,583,138	+				-1.1
6,583,139	-				+1.0
6,583,189	+				-0.0
6,583,189	+				+1.0
6,583,190	-				+1.0
6,583,190	-				-0.0
6,583,190	-				+1.0
6,583,190	-				-0.0
6,583,190	-				+1.0
6,583,190	-				-0.0
6,583,190	-				+1.0
6,583,190	-				+1.0
6,583,192	+				-0.7
6,583,192	+				+1.0
6,583,192	+				+1.0
6,583,192	+				-1.0
6,583,193	-				+1.0
6,583,193	-				-0.6
6,583,193	-				+1.0
6,583,193	-				-0.6
6,583,193	-				-0.0
6,583,195	+				-0.0
6,583,196	-				+1.0
6,583,209	-				-0.0
6,583,211	+				-0.8
6,583,211	+				-0.1
6,583,211	+				-0.6
6,583,211	+				+1.0
6,583,211	+				-0.6
6,583,211	+				+1.0
6,583,211	+				+1.0
6,583,211	+				-1.0
6,583,212	-				-1.6
6,583,212	-				+1.0
6,583,212	-				+0.1
6,583,212	-				-0.4
6,583,212	-				-1.0
6,583,212	-				-0.0
6,583,212	-				+1.0
6,583,255	-				-0.9
6,583,258	+				-2.5
6,583,258	+				-0.0
6,583,259	-				+1.0
6,583,686	-		Pf6N2E2_5768	0.47	-0.9
6,583,874	-		Pf6N2E2_5768	0.67	+1.0
6,583,875	+		Pf6N2E2_5768	0.68	+1.0
6,583,875	+		Pf6N2E2_5768	0.68	-0.7
6,583,875	+		Pf6N2E2_5768	0.68	+1.0
6,583,876	-		Pf6N2E2_5768	0.68	+1.0
6,584,049	+		Pf6N2E2_5768	0.86	+1.0
6,584,049	+		Pf6N2E2_5768	0.86	+1.0
6,584,050	-		Pf6N2E2_5768	0.87	-0.0
6,584,050	-		Pf6N2E2_5768	0.87	+1.0
6,584,148	+				+1.0
6,584,149	-				+1.0
6,584,152	+				+1.0
6,584,152	+				+1.0
6,584,152	+				-0.6
6,584,153	-				+1.0
6,584,153	-				+1.0
6,584,153	-				+1.0