Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5724

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
6,541,308	+		Pf6N2E2_5723	0.62	-0.0
6,541,309	-		Pf6N2E2_5723	0.62	-1.3
6,541,309	-		Pf6N2E2_5723	0.62	-0.6
6,541,396	-		Pf6N2E2_5723	0.66	-0.6
6,541,696	-		Pf6N2E2_5723	0.79	-1.3
6,541,800	+		Pf6N2E2_5723	0.84	-1.1
6,541,800	+		Pf6N2E2_5723	0.84	-0.8
6,541,801	-		Pf6N2E2_5723	0.84	-0.0
6,541,801	-		Pf6N2E2_5723	0.84	+1.0
6,541,801	-		Pf6N2E2_5723	0.84	+1.0
6,541,923	+		Pf6N2E2_5723	0.89	-1.9
6,542,167	-				+1.0
6,542,167	-				+1.0
6,542,260	+				+1.0
6,542,261	-				-1.0
6,542,285	+				-0.6
6,542,285	+				+1.0
6,542,285	+				+1.0
6,542,285	+				+1.0
6,542,285	+				+2.0
6,542,286	-				+1.0
6,542,286	-				-0.6
6,542,286	-				-0.2
6,542,286	-				+1.0
6,542,286	-				-0.0
6,542,286	-				+1.0
6,542,286	-				+1.0
6,542,336	+				+1.0
6,542,366	+		Pf6N2E2_5724	0.10	-0.6
6,542,366	+		Pf6N2E2_5724	0.10	-0.6
6,542,386	+		Pf6N2E2_5724	0.12	-0.6
6,542,386	+		Pf6N2E2_5724	0.12	-1.1
6,542,386	+		Pf6N2E2_5724	0.12	+1.0
6,542,387	-		Pf6N2E2_5724	0.13	-1.0
6,542,387	-		Pf6N2E2_5724	0.13	-0.0
6,542,387	-		Pf6N2E2_5724	0.13	+1.0
6,542,387	-		Pf6N2E2_5724	0.13	-1.6
6,542,402	+		Pf6N2E2_5724	0.14	-0.8
6,542,402	+		Pf6N2E2_5724	0.14	+1.0
6,542,402	+		Pf6N2E2_5724	0.14	-1.0
6,542,403	-		Pf6N2E2_5724	0.15	-1.6
6,542,483	+		Pf6N2E2_5724	0.24	+1.0
6,542,483	+		Pf6N2E2_5724	0.24	+1.0
6,542,483	+		Pf6N2E2_5724	0.24	-2.1
6,542,483	+		Pf6N2E2_5724	0.24	-0.3
6,542,483	+		Pf6N2E2_5724	0.24	-0.0
6,542,484	-		Pf6N2E2_5724	0.24	-0.0
6,542,484	-		Pf6N2E2_5724	0.24	+1.0
6,542,484	-		Pf6N2E2_5724	0.24	-0.0
6,542,486	+		Pf6N2E2_5724	0.24	+1.0
6,542,486	+		Pf6N2E2_5724	0.24	-1.3
6,542,486	+		Pf6N2E2_5724	0.24	-0.0
6,542,486	+		Pf6N2E2_5724	0.24	-0.6
6,542,487	-		Pf6N2E2_5724	0.25	+2.6
6,542,487	-		Pf6N2E2_5724	0.25	+1.0
6,542,487	-		Pf6N2E2_5724	0.25	-0.8
6,542,487	-		Pf6N2E2_5724	0.25	+1.0
6,542,487	-		Pf6N2E2_5724	0.25	+1.0
6,542,487	-		Pf6N2E2_5724	0.25	+1.0
6,542,487	-		Pf6N2E2_5724	0.25	+1.0
6,542,598	-		Pf6N2E2_5724	0.38	-1.2
6,542,850	-		Pf6N2E2_5724	0.68	+1.0
6,542,999	-		Pf6N2E2_5724	0.86	-0.0
6,543,126	+				+1.0
6,543,126	+				-1.1
6,543,127	-				+1.0
6,543,430	+		Pf6N2E2_5725	0.53	-0.1
6,543,430	+		Pf6N2E2_5725	0.53	-0.0
6,543,431	-		Pf6N2E2_5725	0.54	+1.0
6,543,431	-		Pf6N2E2_5725	0.54	+1.0
6,543,431	-		Pf6N2E2_5725	0.54	+1.0
6,543,433	+		Pf6N2E2_5725	0.54	-0.7
6,543,433	+		Pf6N2E2_5725	0.54	+1.0
6,543,433	+		Pf6N2E2_5725	0.54	-0.8
6,543,433	+		Pf6N2E2_5725	0.54	+0.4
6,543,433	+		Pf6N2E2_5725	0.54	-0.0
6,543,433	+		Pf6N2E2_5725	0.54	-0.8
6,543,433	+		Pf6N2E2_5725	0.54	-1.0
6,543,434	-		Pf6N2E2_5725	0.54	+1.0
6,543,652	+				-1.0
6,543,762	+				+1.0
6,543,870	+		Pf6N2E2_5726	0.30	+1.0
6,543,870	+		Pf6N2E2_5726	0.30	+1.0
6,543,870	+		Pf6N2E2_5726	0.30	-0.6
6,543,870	+		Pf6N2E2_5726	0.30	-1.3
6,543,870	+		Pf6N2E2_5726	0.30	-0.7
6,543,870	+		Pf6N2E2_5726	0.30	+1.0
6,543,870	+		Pf6N2E2_5726	0.30	+1.0
6,543,870	+		Pf6N2E2_5726	0.30	+1.0
6,543,871	-		Pf6N2E2_5726	0.30	+0.7
6,543,871	-		Pf6N2E2_5726	0.30	+1.0
6,543,871	-		Pf6N2E2_5726	0.30	-0.6
6,543,871	-		Pf6N2E2_5726	0.30	-1.1
6,543,871	-		Pf6N2E2_5726	0.30	-0.0
6,543,871	-		Pf6N2E2_5726	0.30	-0.0
6,543,871	-		Pf6N2E2_5726	0.30	-0.0
6,543,871	-		Pf6N2E2_5726	0.30	-0.0
6,543,871	-		Pf6N2E2_5726	0.30	-0.0
6,543,871	-		Pf6N2E2_5726	0.30	-1.0
6,543,871	-		Pf6N2E2_5726	0.30	+0.4
6,543,874	+		Pf6N2E2_5726	0.32	-1.4
6,543,874	+		Pf6N2E2_5726	0.32	+1.0
6,543,875	-		Pf6N2E2_5726	0.32	+1.0
6,543,875	-		Pf6N2E2_5726	0.32	-0.0
6,543,970	+		Pf6N2E2_5726	0.81	+1.0
6,543,970	+		Pf6N2E2_5726	0.81	-0.6
6,543,970	+		Pf6N2E2_5726	0.81	-1.7
6,543,970	+		Pf6N2E2_5726	0.81	+1.0
6,543,970	+		Pf6N2E2_5726	0.81	-0.0
6,543,970	+		Pf6N2E2_5726	0.81	-0.6
6,543,970	+		Pf6N2E2_5726	0.81	+1.0
6,543,970	+		Pf6N2E2_5726	0.81	-0.0
6,543,970	+		Pf6N2E2_5726	0.81	+1.0
6,543,970	+		Pf6N2E2_5726	0.81	-1.1
6,543,970	+		Pf6N2E2_5726	0.81	-0.0
6,543,970	+		Pf6N2E2_5726	0.81	-2.0
6,543,971	-		Pf6N2E2_5726	0.82	-0.6
6,543,971	-		Pf6N2E2_5726	0.82	-0.4
6,543,971	-		Pf6N2E2_5726	0.82	+1.0
6,543,971	-		Pf6N2E2_5726	0.82	-0.4
6,543,971	-		Pf6N2E2_5726	0.82	-0.6
6,543,973	-		Pf6N2E2_5726	0.83	-0.8
6,543,993	-				+1.0
6,543,993	-				-0.1
6,543,993	-				+1.0
6,543,993	-				-0.6
6,543,993	-				+1.0
6,544,028	+				+1.0
6,544,028	+				-0.0
6,544,028	+				+1.0
6,544,028	+				+0.7
6,544,029	-				+0.1
6,544,029	-				-0.0
6,544,062	-				-0.0
6,544,080	-				-0.0
6,544,083	+				-1.0
6,544,084	-				+1.0
6,544,084	-				+0.7
6,544,084	-				+1.0