Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4672

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
5,401,832	-		Pf6N2E2_4671	0.81	+0.1
5,401,832	-		Pf6N2E2_4671	0.81	+0.1
5,401,855	-		Pf6N2E2_4671	0.82	+1.1
5,401,855	-		Pf6N2E2_4671	0.82	-1.6
5,401,919	-		Pf6N2E2_4671	0.85	+1.1
5,401,919	-		Pf6N2E2_4671	0.85	+1.1
5,402,043	+				-0.6
5,402,043	+				+1.1
5,402,043	+				+1.1
5,402,043	+				+1.1
5,402,044	-				-0.7
5,402,044	-				+1.1
5,402,044	-				+1.1
5,402,044	-				+1.1
5,402,044	-				+1.1
5,402,044	-				+0.1
5,402,240	+				+0.1
5,402,240	+				-0.5
5,402,240	+				-0.6
5,402,241	-				+0.1
5,402,241	-				-1.3
5,402,241	-				-0.5
5,402,241	-				-0.5
5,402,242	+				+1.1
5,402,243	-				-0.5
5,402,243	-				-0.8
5,402,243	-				+1.1
5,402,243	-				+1.1
5,402,243	-				+2.7
5,402,252	+				+0.1
5,402,253	-				-0.8
5,402,348	-				+1.1
5,402,348	-				+1.1
5,402,589	+				+0.1
5,402,590	-				+0.1
5,402,590	-				+1.1
5,402,590	-				+1.1
5,402,679	+				-0.0
5,402,679	+				+0.1
5,402,679	+				-0.5
5,402,680	-				+1.1
5,402,841	+		Pf6N2E2_4672	0.22	-2.4
5,402,841	+		Pf6N2E2_4672	0.22	+0.1
5,402,841	+		Pf6N2E2_4672	0.22	-0.5
5,402,842	-		Pf6N2E2_4672	0.22	+1.1
5,403,240	+		Pf6N2E2_4672	0.56	+1.1
5,403,339	+		Pf6N2E2_4672	0.64	-1.3
5,403,531	+		Pf6N2E2_4672	0.80	-1.5
5,403,594	+		Pf6N2E2_4672	0.86	+0.1
5,403,594	+		Pf6N2E2_4672	0.86	+1.1
5,403,595	-		Pf6N2E2_4672	0.86	+1.1
5,403,595	-		Pf6N2E2_4672	0.86	+0.1
5,403,611	-		Pf6N2E2_4672	0.87	+0.1
5,403,671	+				+0.1
5,403,671	+				-0.0
5,403,671	+				+0.5
5,403,672	-				+1.1
5,403,777	+				+1.1
5,403,777	+				+0.1
5,403,778	-				+0.1
5,404,043	+				-0.3
5,404,043	+				+1.1
5,404,044	-				-0.3
5,404,044	-				-1.0
5,404,044	-				+1.1
5,404,044	-				-0.2
5,404,657	+		Pf6N2E2_4673	0.51	+1.1
5,404,657	+		Pf6N2E2_4673	0.51	+1.1
5,404,658	-		Pf6N2E2_4673	0.51	-0.5
5,404,664	+		Pf6N2E2_4673	0.52	-0.4
5,404,665	-		Pf6N2E2_4673	0.52	+1.1