Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4268

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
4,964,162	+		Pf6N2E2_4266	0.55	+1.1
4,964,163	-		Pf6N2E2_4266	0.55	+0.1
4,964,163	-		Pf6N2E2_4266	0.55	+1.1
4,964,163	-		Pf6N2E2_4266	0.55	+1.1
4,964,163	-		Pf6N2E2_4266	0.55	-0.9
4,964,163	-		Pf6N2E2_4266	0.55	+1.1
4,964,237	-		Pf6N2E2_4266	0.63	-0.6
4,964,247	+		Pf6N2E2_4266	0.64	+1.1
4,964,247	+		Pf6N2E2_4266	0.64	+1.1
4,964,248	-		Pf6N2E2_4266	0.64	-2.1
4,964,248	-		Pf6N2E2_4266	0.64	-0.5
4,964,309	+		Pf6N2E2_4266	0.70	-1.3
4,964,309	+		Pf6N2E2_4266	0.70	+0.1
4,964,309	+		Pf6N2E2_4266	0.70	+0.1
4,964,309	+		Pf6N2E2_4266	0.70	+1.1
4,964,309	+		Pf6N2E2_4266	0.70	+0.1
4,964,310	-		Pf6N2E2_4266	0.71	+0.1
4,964,310	-		Pf6N2E2_4266	0.71	+1.1
4,964,310	-		Pf6N2E2_4266	0.71	-0.6
4,964,310	-		Pf6N2E2_4266	0.71	+0.1
4,964,310	-		Pf6N2E2_4266	0.71	+1.1
4,964,310	-		Pf6N2E2_4266	0.71	+0.1
4,964,335	+		Pf6N2E2_4266	0.73	-0.5
4,964,336	-		Pf6N2E2_4266	0.73	+0.7
4,964,395	-		Pf6N2E2_4266	0.79	+1.1
4,964,738	+		Pf6N2E2_4267	0.31	+1.1
4,964,738	+		Pf6N2E2_4267	0.31	+0.1
4,964,738	+		Pf6N2E2_4267	0.31	-0.5
4,964,738	+		Pf6N2E2_4267	0.31	+1.1
4,964,739	-		Pf6N2E2_4267	0.31	+1.1
4,964,739	-		Pf6N2E2_4267	0.31	-0.9
4,964,739	-		Pf6N2E2_4267	0.31	+0.1
4,964,739	-		Pf6N2E2_4267	0.31	+1.1
4,964,739	-		Pf6N2E2_4267	0.31	+0.1
4,964,739	-		Pf6N2E2_4267	0.31	-0.7
4,964,739	-		Pf6N2E2_4267	0.31	+1.7
4,964,739	-		Pf6N2E2_4267	0.31	+0.1
4,964,817	+		Pf6N2E2_4267	0.50	+1.1
4,964,817	+		Pf6N2E2_4267	0.50	-0.9
4,964,818	-		Pf6N2E2_4267	0.50	+1.1
4,964,818	-		Pf6N2E2_4267	0.50	+1.1
4,964,818	-		Pf6N2E2_4267	0.50	-0.5
4,964,818	-		Pf6N2E2_4267	0.50	+1.1
4,964,818	-		Pf6N2E2_4267	0.50	-0.5
4,965,061	+				-1.2
4,965,062	-				-0.3
4,965,062	-				+0.9
4,965,062	-				-1.5
4,965,062	-				+1.1
4,965,062	-				+1.3
4,965,062	-				+0.1
4,965,083	+				-1.0
4,965,084	-				-0.5
4,965,084	-				+0.1
4,965,096	+				+1.1
4,965,097	-				-1.2
4,965,104	+				+0.1
4,965,104	+				+1.1
4,965,104	+				+0.1
4,965,104	+				+1.1
4,965,105	-				+0.5
4,965,105	-				-0.2
4,965,105	-				+1.1
4,965,156	+				-0.5
4,965,265	-		Pf6N2E2_4268	0.13	+4.9
4,965,292	+		Pf6N2E2_4268	0.16	-1.2
4,965,344	+		Pf6N2E2_4268	0.22	-1.9
4,965,344	+		Pf6N2E2_4268	0.22	-0.5
4,965,344	+		Pf6N2E2_4268	0.22	-0.9
4,965,344	+		Pf6N2E2_4268	0.22	+0.1
4,965,344	+		Pf6N2E2_4268	0.22	-0.5
4,965,345	-		Pf6N2E2_4268	0.23	+0.5
4,965,345	-		Pf6N2E2_4268	0.23	-0.5
4,965,345	-		Pf6N2E2_4268	0.23	+1.1
4,965,345	-		Pf6N2E2_4268	0.23	-2.1
4,965,345	-		Pf6N2E2_4268	0.23	+0.3
4,965,478	+		Pf6N2E2_4268	0.38	-0.5
4,965,478	+		Pf6N2E2_4268	0.38	+0.1
4,965,479	-		Pf6N2E2_4268	0.38	+0.4
4,965,479	-		Pf6N2E2_4268	0.38	+0.1
4,965,479	-				+1.1
4,965,851	+		Pf6N2E2_4268	0.81	-0.3
4,965,851	+		Pf6N2E2_4268	0.81	+0.1
4,965,854	+		Pf6N2E2_4268	0.81	-0.1
4,965,854	+		Pf6N2E2_4268	0.81	-1.2
4,965,854	+		Pf6N2E2_4268	0.81	-1.6
4,965,854	+		Pf6N2E2_4268	0.81	+1.1
4,965,855	-		Pf6N2E2_4268	0.81	+1.1
4,965,940	+				+1.1
4,965,940	+				+1.1
4,965,940	+				+1.1
4,965,940	+				-0.5
4,965,940	+				+1.1
4,965,940	+				+0.1
4,965,940	+				+1.1
4,965,940	+				-0.9
4,965,940	+				-0.5
4,965,941	-				+0.1
4,966,078	+				+1.1
4,966,079	-				-0.9
4,966,079	-				+0.2
4,966,079	-				+0.1
4,966,079	-				+1.1
4,966,109	+				+0.1
4,966,110	-				+0.1
4,966,110	-				+1.1
4,966,110	-				+0.1
4,966,110	-				+0.3
4,966,110	-				+0.1
4,966,261	+		Pf6N2E2_4269	0.29	+0.1
4,966,380	+		Pf6N2E2_4269	0.55	-1.5
4,966,380	+		Pf6N2E2_4269	0.55	+0.4
4,966,380	+		Pf6N2E2_4269	0.55	-0.5
4,966,380	+		Pf6N2E2_4269	0.55	+0.1
4,966,380	+		Pf6N2E2_4269	0.55	-0.5
4,966,380	+		Pf6N2E2_4269	0.55	+0.1
4,966,380	+		Pf6N2E2_4269	0.55	+0.1
4,966,381	-		Pf6N2E2_4269	0.55	+0.1
4,966,381	-		Pf6N2E2_4269	0.55	-0.5
4,966,467	+		Pf6N2E2_4269	0.74	+0.1
4,966,467	+		Pf6N2E2_4269	0.74	+1.1
4,966,479	+		Pf6N2E2_4269	0.77	-0.9
4,966,497	+		Pf6N2E2_4269	0.81	+0.1
4,966,498	-		Pf6N2E2_4269	0.81	+1.1
4,966,498	-		Pf6N2E2_4269	0.81	-0.5
4,966,498	-		Pf6N2E2_4269	0.81	+1.1
4,966,498	-		Pf6N2E2_4269	0.81	-0.5
4,966,515	+		Pf6N2E2_4269	0.85	-1.7
4,966,516	-		Pf6N2E2_4269	0.85	+1.1
4,966,516	-		Pf6N2E2_4269	0.85	+0.1
4,966,617	+				+1.1
4,966,617	+				+1.1
4,966,617	+				-0.9
4,966,617	+				+0.1
4,966,617	+				+1.1
4,966,618	-				+1.1
4,966,618	-				+1.1
4,966,618	-				-0.9
4,966,618	-				+1.1
4,966,697	-				+1.1
4,966,762	+				+0.1
4,966,762	+				-0.2
4,966,762	+				-1.5
4,966,763	-				+0.5
4,966,763	-				-0.5
4,966,763	-				+0.1
4,966,763	-				-0.5
4,966,763	-				-0.5
4,966,764	+				+0.5
4,966,764	+				-0.6
4,966,764	+				+0.1
4,966,764	+				-0.5
4,966,764	+				-0.2
4,966,764	+				-1.2
4,966,764	+				-0.5
4,966,764	+				+1.1
4,966,764	+				+0.1
4,966,764	+				-0.5
4,966,764	+				+1.1
4,966,765	-				-1.9
4,966,765	-				+0.9
4,966,765	-				+0.1
4,966,765	-				+1.1
4,966,765	-				-0.8
4,966,765	-				-2.0
4,966,765	-				+0.1
4,966,765	-				-0.5
4,966,765	-				+0.1
4,966,765	-				+1.1
4,966,765	-				-1.2
4,966,984	+				+0.1
4,966,985	-				-0.5
4,966,992	+				+0.1