Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3805

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
4,432,393	+		Pf6N2E2_3804	0.44	+1.0
4,432,393	+		Pf6N2E2_3804	0.44	-0.7
4,432,393	+		Pf6N2E2_3804	0.44	+0.0
4,432,543	+		Pf6N2E2_3804	0.54	+0.0
4,432,543	+		Pf6N2E2_3804	0.54	-1.3
4,432,682	-		Pf6N2E2_3804	0.64	-0.6
4,432,682	-		Pf6N2E2_3804	0.64	-1.3
4,432,867	+		Pf6N2E2_3804	0.76	+0.0
4,432,867	+		Pf6N2E2_3804	0.76	-1.8
4,432,867	+		Pf6N2E2_3804	0.76	-0.3
4,432,868	-		Pf6N2E2_3804	0.76	+0.0
4,432,906	+		Pf6N2E2_3804	0.79	+0.0
4,432,906	+		Pf6N2E2_3804	0.79	+1.0
4,432,906	+		Pf6N2E2_3804	0.79	+2.6
4,432,907	-		Pf6N2E2_3804	0.79	+0.0
4,433,156	-				-0.6
4,433,156	-				+1.0
4,433,204	+				+0.0
4,433,371	-				-1.0
4,433,483	+				+1.0
4,433,925	+		Pf6N2E2_3805	0.33	+1.0
4,433,925	+		Pf6N2E2_3805	0.33	+1.0
4,433,925	+		Pf6N2E2_3805	0.33	+1.2
4,433,925	+		Pf6N2E2_3805	0.33	-0.6
4,433,925	+		Pf6N2E2_3805	0.33	+0.0
4,433,925	+		Pf6N2E2_3805	0.33	+0.0
4,433,925	+		Pf6N2E2_3805	0.33	-1.8
4,433,925	+		Pf6N2E2_3805	0.33	+1.3
4,433,925	+		Pf6N2E2_3805	0.33	+0.0
4,433,926	-		Pf6N2E2_3805	0.33	+1.3
4,433,926	-		Pf6N2E2_3805	0.33	-0.4
4,433,926	-		Pf6N2E2_3805	0.33	+0.6
4,433,926	-		Pf6N2E2_3805	0.33	+0.0
4,433,926	-		Pf6N2E2_3805	0.33	+1.0
4,433,926	-		Pf6N2E2_3805	0.33	+1.0
4,434,000	+		Pf6N2E2_3805	0.37	+0.0
4,434,000	+		Pf6N2E2_3805	0.37	-3.4
4,434,000	+		Pf6N2E2_3805	0.37	+1.0
4,434,001	-		Pf6N2E2_3805	0.37	+0.0
4,434,001	-		Pf6N2E2_3805	0.37	+0.0
4,434,001	-		Pf6N2E2_3805	0.37	-0.6
4,434,001	-		Pf6N2E2_3805	0.37	-0.9
4,434,079	-		Pf6N2E2_3805	0.42	+1.0
4,434,225	+		Pf6N2E2_3805	0.51	+0.0
4,434,360	+		Pf6N2E2_3805	0.59	+0.0
4,434,361	-		Pf6N2E2_3805	0.59	+1.0
4,434,361	-		Pf6N2E2_3805	0.59	+1.0
4,434,565	-		Pf6N2E2_3805	0.71	+0.0
4,434,597	+		Pf6N2E2_3805	0.73	+1.0
4,434,598	-		Pf6N2E2_3805	0.73	+0.0
4,434,601	+		Pf6N2E2_3805	0.73	-0.7
4,434,631	-		Pf6N2E2_3805	0.75	+0.0
4,434,660	+		Pf6N2E2_3805	0.76	+1.0
4,434,660	+		Pf6N2E2_3805	0.76	-0.2
4,434,660	+		Pf6N2E2_3805	0.76	+1.0
4,434,660	+		Pf6N2E2_3805	0.76	-0.6
4,434,661	-		Pf6N2E2_3805	0.76	+0.0
4,434,661	-		Pf6N2E2_3805	0.76	+1.0
4,434,852	+		Pf6N2E2_3805	0.88	-0.9
4,434,852	+		Pf6N2E2_3805	0.88	+0.0
4,434,881	+		Pf6N2E2_3805	0.90	-2.4
4,434,881	+		Pf6N2E2_3805	0.90	-0.3
4,434,881	+		Pf6N2E2_3805	0.90	+1.0
4,434,882	-		Pf6N2E2_3805	0.90	+1.0
4,434,882	-		Pf6N2E2_3805	0.90	+0.0
4,434,882	-		Pf6N2E2_3805	0.90	+1.0
4,434,882	-		Pf6N2E2_3805	0.90	-1.0
4,434,891	+				+0.0
4,434,892	-				+0.0
4,435,132	-				-1.4
4,435,144	+				-1.7
4,435,144	+				+0.0
4,435,144	+				+1.0
4,435,144	+				+1.0
4,435,144	+				-0.6
4,435,145	-				+1.0
4,435,150	+				+1.0
4,435,151	-				-0.4
4,435,151	-				+1.0
4,435,151	-				+1.0
4,435,159	-				-1.9
4,435,164	+				+1.0
4,435,176	+				-0.6
4,435,587	-				-2.1
4,435,587	-				-0.6
4,435,902	+				-1.0
4,435,902	+				-1.0
4,435,902	+				+1.0
4,435,902	+				+0.0
4,435,902	+				-1.0